CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MTERF9
(
Arabidopsis thaliana
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
AT5G55580
T262070_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G55580.1
mTERF
162
465
SSRKYVEKLYPRLAEEIDIDPKCVPLLDYLSTFGLKESHFVQMYERHMPSLQINVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKKVRKGPFPLSSLVPNDESFC
AT5G55580.2
mTERF
56
359
SSRKYVEKLYPRLAEEIDIDPKCVPLLDYLSTFGLKESHFVQMYERHMPSLQINVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKKVRKGPFPLSSLVPNDESFC
AT5G55580.3
mTERF
177
264
EIDIDPKCVPLLDYLSTFGLKESHFVQMYERHMPSLQINVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMG
AT5G55580.3
mTERF
259
395
ISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLST
Links
Other
mTERF
family TFs
Other
Arabidopsis thaliana
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.8__1461__AT5G55580.1
Arabidopsis lyrata
fgenesh2_kg.8__1461__AT5G55580.1
N
0.990
Bostr.26833s0699
Boechera stricta
Bostr.26833s0699
N
0.983
Cagra.6942s0013
Capsella grandiflora
Cagra.6942s0013
N
0.973
Carubv10026264m.g
Capsella rubella
Carubv10026264m.g
N
0.966
Bo3g021450
Brassica oleracea
Bo3g021450
N
0.959
Bra028970
Brassica rapa
Bra028970
N
0.959
Thhalv10013311m.g
Eutrema salsugineum
Thhalv10013311m.g
N
0.929
TCM_030731
Theobroma cacao
TCM_030731
N
0.807
PK04020.1
Cannabis sativa
PK04020.1
N
0.807
LjSGA_093866.1
Lotus japonicus
LjSGA_093866.1
N
0.807
Ciclev10008511m.g
Citrus clementina
Ciclev10008511m.g
N
0.805
SapurV1A.0031s0210
Salix purpurea
SapurV1A.0031s0210
N
0.803
Eucgr.F03524
Eucalyptus grandis
Eucgr.F03524
N
0.797
GLYMA02G46750
Glycine max
GLYMA02G46750
N
0.790
GLYMA14G01940
Glycine max
GLYMA14G01940
N
0.790
POPTR_0001s37280
Populus trichocarpa
POPTR_0001s37280
N
0.790
Gorai.013G155100
Gossypium raimondii
Gorai.013G155100
N
0.790
MTR_5g094610
Medicago truncatula
MTR_5g094610
N
0.783
27613.m000644
Ricinus communis
27613.m000644
N
0.773
cassava31397.valid.m1
Manihot esculenta
cassava31397.valid.m1
N
0.773
Ca_09700
Cicer arietinum
Ca_09700
N
0.759
mgf013248m
Mimulus guttatus
mgf013248m
N
0.736