CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_kg.5__1064__AT3G46950.1
(
Arabidopsis lyrata
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
fgenesh2_kg.5__1064__AT3G46950.1
T262698_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.5__1064__AT3G46950.1
mTERF
88
409
LNLFRSNGFKDSQISRIIRAYPRLLVIDAEKSLRPKLQFLKSRGASSSEVTEIVSNVPTILGKKGEKSISLYYDFVKDIMEDGKSLGHSWPEGKKGNKIRNISVLRELGVPQKLLFPLVISNYQPVCGKEKFEETLKKVVDMGFDPTKSTFVEALHVVYKMSEKTIEEKVNVYKRLGFSEVDIWAIFKKWPFFLKFSEKKIILMYETLKKCGLVEEEVISDSIETFLDLGFSRDEFKMMVKRYPQCTAYTAETVRKKFEVLVKKMNWPLEDVVLIPAVLGYSLEKRIVPRTNVIKALMSKGLIGSENPPISSVLVCTDQEFL
Links
Other
mTERF
family TFs
Other
Arabidopsis lyrata
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT3G46950
Arabidopsis thaliana
AT3G46950
N
0.889
Bostr.18473s0264
Boechera stricta
Bostr.18473s0264
N
0.794
Cagra.0448s0035
Capsella grandiflora
Cagra.0448s0035
N
0.761
Carubv10018684m.g
Capsella rubella
Carubv10018684m.g
N
0.761
Bostr.22157s0123
Boechera stricta
Bostr.22157s0123
I
0.735
AT1G61960
Arabidopsis thaliana
AT1G61960
N
0.713
Bra018182
Brassica rapa
Bra018182
N
0.708
Cagra.0043s0013
Capsella grandiflora
Cagra.0043s0013
N
0.704