CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

PGSC0003DMG400000727 *(Solanum tuberosum)* mTERF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF02536 (mTERF)	IPR003690	PGSC0003DMG400000727	T263355_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
PGSC0003DMT400001915	mTERF	251	405	LKHNELSYPHIANLICKSRGDLESIRRLAEWLKSIHVKGRFIGLVMIRAKGNVLGRSLEELDEIVGYLEYKGVKRDWIGYIVGRCPEILSFSMEELESHTNFYFDMGMDEKDFGTMVFDYPKVLGYFSMEEMNQKVAYLKEFGLSNEDVGRLLSF
PGSC0003DMT400001915	mTERF	315	590	VGYLEYKGVKRDWIGYIVGRCPEILSFSMEELESHTNFYFDMGMDEKDFGTMVFDYPKVLGYFSMEEMNQKVAYLKEFGLSNEDVGRLLSFKPHLMGCGIEEKFKPLVKYFYYLGISKDGMRKILVTRPVLFCVDFETTIVPKVQFLRDIGVQQDAIGNVLVRFPRLLTFSLYKKIRPVVIFLLTKAGVSQRNIGKVIALGPELLGCSIANKLDHNVKYFLSLGITLRQLGEMVADFPMLLTYNIDILRPKYRYLRRMMVRPLQDLIEFPRYIWHN
PGSC0003DMT400001916	mTERF	201	391	NLVSELPDFIDYVMIQAASMKQMPEFLGSSFNVRARAFIDDSGVVPIVRWLKHNELSYPHIANLICKSRGDLESIRRLAEWLKSIHVKGRFIGLVMIRAKGNVLGRSLEELDEIVGYLEYKGVKRDWIGYIVGRCPEILSFSMEELESHTNFYFDMGMDEKDFGTMVFDYPKVLGYFSMEEMNQKVAYLKE
PGSC0003DMT400001916	mTERF	315	623	VGYLEYKGVKRDWIGYIVGRCPEILSFSMEELESHTNFYFDMGMDEKDFGTMVFDYPKVLGYFSMEEMNQKVAYLKEFGLSNEDVGRLLSFKPHLMGCGIEEKFKPLVKYFYYLGISKDGMRKILVTRPVLFCVDFETTIVPKVQFLRDIGVQQDAIGNVLVRFPRLLTFSLYKKIRPVVIFLLTKAGVSQRNIGKVIALGPELLGCSIANKLDHNVKYFLSLGITLRQLGEMVADFPMLLTYNIDILRPKYRYLRRMMVRPLQDLIEFPRFFSYSLDDRIIPRHKIMVENRVNFKLRYMLSSTDDEFK
PGSC0003DMT400001917	mTERF	20	295	VGYLEYKGVKRDWIGYIVGRCPEILSFSMEELESHTNFYFDMGMDEKDFGTMVFDYPKVLGYFSMEEMNQKVAYLKEFGLSNEDVGRLLSFKPHLMGCGIEEKFKPLVKYFYYLGISKDGMRKILVTRPVLFCVDFETTIVPKVQFLRDIGVQQDAIGNVLVRFPRLLTFSLYKKIRPVVIFLLTKAGVSQRNIGKVIALGPELLGCSIANKLDHNVKYFLSLGITLRQLGEMVADFPMLLTYNIDILRPKYRYLRRMMVRPLQDLIEFPRYIWHN
PGSC0003DMT400001918	mTERF	20	328	VGYLEYKGVKRDWIGYIVGRCPEILSFSMEELESHTNFYFDMGMDEKDFGTMVFDYPKVLGYFSMEEMNQKVAYLKEFGLSNEDVGRLLSFKPHLMGCGIEEKFKPLVKYFYYLGISKDGMRKILVTRPVLFCVDFETTIVPKVQFLRDIGVQQDAIGNVLVRFPRLLTFSLYKKIRPVVIFLLTKAGVSQRNIGKVIALGPELLGCSIANKLDHNVKYFLSLGITLRQLGEMVADFPMLLTYNIDILRPKYRYLRRMMVRPLQDLIEFPRFFSYSLDDRIIPRHKIMVENRVNFKLRYMLSSTDDEFK

Links
Other mTERF family TFs
Other *Solanum tuberosum* TFs

3 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
Solyc01g109630.2	Solanum lycopersicum	Solyc01g109630.2	N	0.908
chr3.CM0091.690.nd	Lotus japonicus	chr3.CM0091.690.nd	N	0.772