CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0017s10070
(
Populus trichocarpa
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
POPTR_0017s10070
T263453_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0017s10070.1
mTERF
182
371
AGQLPPHILYLIDLGMDLEQIKGITRKFPAFAYYSLERKIKPVVEFLLDLGIPKSDLPTVLTKRPQLCGISLSENLIPTMTFLENLGVDKRQWAKVIYRFPALLTYSRQKVEVTVDFLSEMGLSAESIGKILTRYPNIVSYNVDDKLRPTAEYFRSLGVDIAILLHRCPQTFGLSIEANLKPVTEFFLER
POPTR_0017s10070.1
mTERF
358
457
EANLKPVTEFFLERGYSIEDIGTMISRYGALYTFSLAENVIPKWEFFLTMDYPKQELVKFPQYFGYSLEARIKPRYALVKEAGVKLLLNQVLSLSYHNFD
Links
Other
mTERF
family TFs
Other
Populus trichocarpa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.1337s0050
Salix purpurea
SapurV1A.1337s0050
N
0.976
cassava12399.valid.m1
Manihot esculenta
cassava12399.valid.m1
N
0.888
GLYMA19G22410
Glycine max
GLYMA19G22410
N
0.760
Cucsa.101810
Cucumis sativus
Cucsa.101810
N
0.743
GLYMA05G15170
Glycine max
GLYMA05G15170
N
0.741
PGSC0003DMG400020220
Solanum tuberosum
PGSC0003DMG400020220
N
0.739
Solyc02g093940.2
Solanum lycopersicum
Solyc02g093940.2
N
0.739