CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold_200354.1
(
Arabidopsis lyrata
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
scaffold_200354.1
T263550_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_200354.1
mTERF
43
257
LSLLRSHGFTDTQISSIITDYPLLLIADGENSIGPKLKFLQSRGASSSELTEIVSKVPRILGKRGHKTISRYYDTVKEIVEADKSSKFEKLCHSLPQGSKQENNIRRNVLVLRELGVPQRLLFSLLISDNGHVCGKKRFEESLNKVVEMGFDPTTASFVRALHVIQGFSDKTIEEKVNLYKRLGFDVGDVWEMFKKFPTFLGLSEKKIANSIETF
scaffold_200354.1
mTERF
242
353
FLGLSEKKIANSIETFVSLRFTRDEIVVMVKRFPPCIGCSAESVKKKTEFLVKKMNWPLKAVASFPQVIGYSLEKRTVPRCNVIKVLISKGLLGSELPPLSCVLSITDPAFL
Links
Other
mTERF
family TFs
Other
Arabidopsis lyrata
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_200374.1
Arabidopsis lyrata
scaffold_200374.1
N
0.769
AT1G62120
Arabidopsis thaliana
AT1G62120
N
0.717
Thhalv10024076m.g
Eutrema salsugineum
Thhalv10024076m.g
N
0.716
Bostr.22157s0161
Boechera stricta
Bostr.22157s0161
N
0.706
Cagra.0043s0018
Capsella grandiflora
Cagra.0043s0018
N
0.703