CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold_201141.1
(
Arabidopsis lyrata
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
scaffold_201141.1
T263557_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_201141.1
mTERF
69
254
LDLLRSYGFTDSQISSIIRSDPQVLIANTATSLGSKLEFLQARGASSSELTEIVSTVPKILGKREGQSISRYYDFVKVIIEADKSSKYVKLSHSLSQGNKIRNVLVLRELGVPQKRLLPLLISKAQPVCGKEKFDASLKKVVEMGFDPTTSTFVVGFTVDDVWAMVKKWPRSLTHSEKKVANSIET
scaffold_201141.1
mTERF
224
351
GFTVDDVWAMVKKWPRSLTHSEKKVANSIETFLGLGFSRDEFLMMVKRFPQCIGFSTELVKKKTEYLVKEMNWPLKAVASIPQVVGYSLEKRTVPRCNVIKVLISKGLLESELPAISSVLTSTSEKFL
Links
Other
mTERF
family TFs
Other
Arabidopsis lyrata
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G62010
Arabidopsis thaliana
AT1G62010
N
0.806
fgenesh1_pg.C_scaffold_2000271
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2000271
N
0.800
AT1G62120
Arabidopsis thaliana
AT1G62120
N
0.712