CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si033490m.g
(
Setaria italica
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Si033490m.g
T263643_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si033490m
mTERF
1
281
MDELETRVRFYTDMGMDEKDFGTMVYDYPRDLGFLSLEEMNSKVQYLKEFGLSTEELGRLLAFKPQLMACSIEERWKPLVKYLYHLNVSRDGMKRMLLVQPTIFCLDLETVIAPKVQFLQDIGVRSDAIGNVLVKFPPVLTYSLYKKIRPVVIFLLTKGGVKQDDIGKVIALDPQLLGCSIAHKLEVSVKYFRSLGIYHFVLGQMVANFPALLRYNVDILRPKYQYLRRVMVRPLKDLIEFPRFFSYSLEDRIEPRHQTLVANRINMKLRYMLTGSDEEFA
Si033551m
mTERF
7
178
CKILFQVQFLQDIGVRSDAIGNVLVKFPPVLTYSLYKKIRPVVIFLLTKGGVKQDDIGKVIALDPQLLGCSIAHKLEVSVKYFRSLGIYHFVLGQMVANFPALLRYNVDILRPKYQYLRRVMVRPLKDLIEFPRFFSYSLEDRIEPRHQTLVANRINMKLRYMLTGSDEEFA
Links
Other
mTERF
family TFs
Other
Setaria italica
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J24943
Panicum virgatum
Pavir.J24943
N
0.953
Pavir.J21714
Panicum virgatum
Pavir.J21714
N
0.949
Pavir.J18166
Panicum virgatum
Pavir.J18166
N
0.902
GRMZM2G175930
Zea mays
GRMZM2G175930
N
0.887
Pavir.J18571
Panicum virgatum
Pavir.J18571
N
0.757
chr3.CM0091.690.nd
Lotus japonicus
chr3.CM0091.690.nd
N
0.728
Pavir.J21307
Panicum virgatum
Pavir.J21307
N
0.710