CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
cassava7182.valid.m1
(
Manihot esculenta
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
cassava7182.valid.m1
T264371_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava7182.valid.m1
mTERF
184
273
PPPKADFQEKMLYLDSIGIDIFSLVDHHRPVILSASLADIKSIVDLFTSMNFNSLEFRRIVSMCPEILASNASTIVPVFTFLLREARVNG
cassava7182.valid.m1
mTERF
266
422
LREARVNGSDIKRVINRRPRLLVSSVKQRLRPTLYFLQSIGIEEVNKHTYLLSCSVEDKLLPRIQYFENMGFLYKDAISMFRRFPPLFNYSIKDNIEPKLNYFVVEMGRDLKELKEFPQYFSFSLENRIKPRHQSCVEKSMYFPLRALLKTNEEQFR
Links
Other
mTERF
family TFs
Other
Manihot esculenta
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28324.m000395
Ricinus communis
28324.m000395
N
0.841
SapurV1A.1401s0040
Salix purpurea
SapurV1A.1401s0040
N
0.781
SapurV1A.0510s0190
Salix purpurea
SapurV1A.0510s0190
N
0.770
SapurV1A.5720s0010
Salix purpurea
SapurV1A.5720s0010
N
0.764
Cla008529
Citrullus lanatus
Cla008529
N
0.738
evm.TU.supercontig_104.58
Carica papaya
evm.TU.supercontig_104.58
N
0.732
Cucsa.083730
Cucumis sativus
Cucsa.083730
N
0.730
gene15310-v1.0-hybrid
Fragaria vesca
gene15310-v1.0-hybrid
N
0.725