CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh4_pg.C_scaffold_40000135
(
Volvox carteri
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
fgenesh4_pg.C_scaffold_40000135
T264468_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh4_pg.C_scaffold_40000135
mTERF
88
337
LAKELGVGQSTVMLAAVQNPGLSSLDATSQVLPSLRALRSAGLSPQDVWFLAAKKHQLLAEPATLSRWLDFLLVYGMQPRDVQNFLLRSTPALMYGTTLYQAGAVVSFLKSLGLKDDLLASRVLCVWPELLGRDVEGQLRPVVTFLMSLGLEVAAVGRVVVMWPEVLLRSVEGQLAPWVTYLRELGCSTTQVGDVIGLCPHLLGFKPEEVFGDVLRALGDLAGICREDVRQMLSSSVAFLIAPSASAGVR
fgenesh4_pg.C_scaffold_40000135
mTERF
323
438
SVAFLIAPSASAGVRAALECLLRHGFDKEQVREMVLARPELLAAKPHDLERSLKFVYHTVGGNNSTVLSCPLLLTKPLGQVLGPRYSFIQKQGLAHKYAGADGSTFEFYKLLVAED
Links
Other
mTERF
family TFs
Other
Volvox carteri
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh4_pg.C_scaffold_40000133
Volvox carteri
fgenesh4_pg.C_scaffold_40000133
N
0.822