CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1361s0038
(
Capsella grandiflora
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cagra.1361s0038
T264619_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1361s0038.1.p
mTERF
234
300
GGLDMLGSVDASFRFLIESFPRLLLLSEENDIKPMVEFLESIGIPKGCSGKVLLLYPPIMLSKTEEI
Cagra.1361s0038.1.p
mTERF
269
578
VEFLESIGIPKGCSGKVLLLYPPIMLSKTEEIKRRVAAALEKVQVSVAYKDSGKVLQKYPWILSPSIQENYSHIISFFNSESVLKMDIDHGIRRWPLLLGCSASNMEMMVKEFDKIGVRDKRMGKVIPKMPQLLLCKPQEFLKVVCFLEDLGFQKEIVGQILCRCPEIFGCSIDNTLQKKLIFLTRFGVSSTHFPRIIKKYPEFLIYDADKTILPRLKYLMEIGISERELAFMIRKFSPLLGYNIEKVLRPKLEFLLNSMKKPVREVIEYPRYFSYSLEKRIKPRFWVLKGRNIECTLQEMLGKNDEEFA
Links
Other
mTERF
family TFs
Other
Capsella grandiflora
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10020021m.g
Capsella rubella
Carubv10020021m.g
N
0.995
Bostr.20129s0329
Boechera stricta
Bostr.20129s0329
N
0.930
fgenesh2_kg.2__2191__AT1G78930.1
Arabidopsis lyrata
fgenesh2_kg.2__2191__AT1G78930.1
N
0.866
AT1G78930
Arabidopsis thaliana
AT1G78930
N
0.820
Thhalv10018313m.g
Eutrema salsugineum
Thhalv10018313m.g
N
0.718