Carubv10001958m.g (Capsella rubella)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02536 (mTERF) IPR003690 Carubv10001958m.g T264639_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10001958m mTERF 105 199
Carubv10002034m mTERF 86 180

Links

Other mTERF family TFs
Other Capsella rubella TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.1008s0003 Capsella grandiflora Cagra.1008s0003 N 1.000
Bostr.25463s0361 Boechera stricta Bostr.25463s0361 N 0.958
Thhalv10028979m.g Eutrema salsugineum Thhalv10028979m.g N 0.918
Solyc11g017430.1 Solanum lycopersicum Solyc11g017430.1 N 0.764
PGSC0003DMG400009226 Solanum tuberosum PGSC0003DMG400009226 N 0.761
chr5.LjT08L18.190.nd Lotus japonicus chr5.LjT08L18.190.nd N 0.761
Gorai.005G074700 Gossypium raimondii Gorai.005G074700 N 0.730
cassava25358.m1 Manihot esculenta cassava25358.m1 N 0.730
SapurV1A.0179s0060 Salix purpurea SapurV1A.0179s0060 N 0.722
29728.m000821 Ricinus communis 29728.m000821 N 0.716
Ca_04306 Cicer arietinum Ca_04306 N 0.716
MTR_1g096340 Medicago truncatula MTR_1g096340 N 0.716
POPTR_0013s11780 Populus trichocarpa POPTR_0013s11780 N 0.712
Cucsa.088330 Cucumis sativus Cucsa.088330 N 0.704
TCM_036345 Theobroma cacao TCM_036345 N 0.703
VIT_18s0072g01130 Vitis vinifera VIT_18s0072g01130 N 0.703
mgf002286m Mimulus guttatus mgf002286m N 0.700