CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10018596m.g
(
Capsella rubella
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Carubv10018596m.g
T264650_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10018596m
mTERF
37
197
AQQAITDYLHTTRSLSYTHAEHIASNASVSIRNLILKLDFSVPTFSKSLRKHLSYHPINEFVFFFESIGIDYNEVSEFLPQKKFFFYEDRSVLDAACALSKFGFPWNKLGNLYKEERLVFVQSPGEIESRLLKLKDLGFTSVAVIGICLAIPRTLSGGGEL
Carubv10018596m
mTERF
134
351
ALSKFGFPWNKLGNLYKEERLVFVQSPGEIESRLLKLKDLGFTSVAVIGICLAIPRTLSGGGELGSEIRCLFVMLRRLFDEFDSHHVFEENVDSLHAISRKIRVFYDLGCDNIEMWELMGINKSLFVEYSEEALMRKVEYFCRFGVRKEDVALLILRNPAIMDFDLDKPVFSVTGMLKHFGLSQDEVDAVAQKYPYVIGRNKLKNLPHVLRALDLQER
Carubv10018596m
mTERF
332
421
GRNKLKNLPHVLRALDLQERIFDRLMNGNHHLLASYSLMDPEEDLDREYQEGLEELQNSRTKTHNVQKLDFLHEIGFGENGMTMKVLQHV
Carubv10018596m
mTERF
385
530
EELQNSRTKTHNVQKLDFLHEIGFGENGMTMKVLQHVHGTAIELQDRFQILLNNGVIFSKTCMLIRSAPKILNQKPHSIQDKLRFLCGEMGSSLEYLESFPAYLLFDLDNRINPRFRFHKWLVEKGLSEKSYSVASMVATSEKAFI
Links
Other
mTERF
family TFs
Other
Capsella rubella
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.3527s0013
Capsella grandiflora
Cagra.3527s0013
N
0.933