CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10021826m.g
(
Capsella rubella
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Carubv10021826m.g
T264664_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10021826m
mTERF
93
296
LNLFRSHGFTDSQISGIITDYPKLLTADAKKSLGPKLQFLQSRGASSSEFTEIVSEVPKILGKTGEITLSRYYDFVKVVIEADKSSKYEKLCHSLPEGSKQENKIRNVLVLRELGVPKRLLFPLLISNGGPVHGKEKFDESIKKVVEMGFNPTTAKFVDALRIVQGLSDKKIEERVNFYRRLGFDGWEIFNKYPIFLALSEKNI
Carubv10021826m
mTERF
278
402
GWEIFNKYPIFLALSEKNILNSVQTFLGLGFSRDEFAKMVNHFPPCIGLSSEMVKKKAGFLVKKMNWPRKSVVSNPAVLGYSLEKRIVPRCKVIKALMSKKLLGETGSELPPIGFVLKDTDKVFL
Links
Other
mTERF
family TFs
Other
Capsella rubella
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.12029s0001
Capsella grandiflora
Cagra.12029s0001
N
0.990
scaffold_200374.1
Arabidopsis lyrata
scaffold_200374.1
N
0.703