CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000315480
(
Malus domestica
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
MDP0000315480
T264973_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000315480
mTERF
83
166
SSSLYSRPSLLEMKNERMEXRARVYDFLRGIGIVPDELDGLELPVTVEVMRERVDFLHNLGLTIEDINNYPLVLGCSVKKNMIP
MDP0000315480
mTERF
168
476
LDYLGKLGVRKSTFTEFLRRYPQVLHASVVIDLSPVVKYLQGMDIKPDDIPQVLEKYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTRYPEILGMRVGRVIKPFVEFLEKLGIPRLGVARLIEKRPHILGFGLEERVKPNIQSLLEFCVREESLASVVAQYPEIIGIDLKPKLLSQQSLIKSVIDLDPEDFGRVVEKMPQVVSLSDRPMMKHADFLKNCGFSLEQVRKMVVGCPQLLALNLDIMKLSFDFFQTEIQRPLDDLVAFPAFFTYGLESTIKPRHKMVSKKALKCSLGWLLNCSDEKFA
Links
Other
mTERF
family TFs
Other
Malus domestica
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene27730-v1.0-hybrid
Fragaria vesca
gene27730-v1.0-hybrid
N
0.828
Pm019894
Prunus mume
Pm019894
N
0.793
PRUPE_ppa004198mg
Prunus persica
PRUPE_ppa004198mg
N
0.783
Gorai.004G084100
Gossypium raimondii
Gorai.004G084100
N
0.749
POPTR_0014s13360
Populus trichocarpa
POPTR_0014s13360
N
0.719
VIT_07s0104g00720
Vitis vinifera
VIT_07s0104g00720
N
0.716
PK15839.1
Cannabis sativa
PK15839.1
N
0.709