CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ba01498
(
Panicum virgatum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Pavir.Ba01498
T265039_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ba01498.1.p
mTERF
154
290
VPLLESVGVRLSSAKLITPYVATAGLPVLIDRVKFLKEMLFSSSDYATIIGRNAKRMMTHLSIPADDALQSTLSFFEKMEARYGGVSMLGHGDLSFPYLIESFPMLLLCSEDNHLKPLIDFLEYIGIPKPNTASVLL
Pavir.Ba01498.1.p
mTERF
272
562
IDFLEYIGIPKPNTASVLLLFPPIILSDIENDIKPRIHEWEKAGIEQEYIGRMLLKYPWILSTGVIENYSRILSFFNRKKEYPSAKSWPHILGCSTKRMNSILELFDDLGISKKMVVPIITSSPQLLLKKPNEFLQIVFFFSEMGFDKETVGKILCCSPEIFASNVESTLKKKIDFLVDFGYPEILLLDTNHTLLPRINYLLEVGLSKKDVRSMIFRFSPLLGYSIELVMKPKLEFLLRSMKKPLKAVVEYPRYFSYSLEGKIKPRFRVLQSKNIECSLTDMLAKNDELFA
Links
Other
mTERF
family TFs
Other
Panicum virgatum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J39757
Panicum virgatum
Pavir.J39757
N
0.873
GRMZM2G142150
Zea mays
GRMZM2G142150
N
0.825
Si029442m.g
Setaria italica
Si029442m.g
N
0.818
Sb02g032730
Sorghum bicolor
Sb02g032730
N
0.813