CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J03450
(
Panicum virgatum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Pavir.J03450
T265071_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J03450.1.p
mTERF
89
372
LNSASNPNAVLALLSGVGLSGADIAAVVAADPLLLRSSVKNVSPRLLALRDCLGLSAPQIVRFLLVGSRALRCCDIVPRLEFFISLFGSFERLLVIMKKSNSFLLSNFERVIEPNIALLCQCGLSVRDIAQLCSRNPWLLTYSPERIKEFLLRAEELGVPRSSRMFKKAVSVVADITKEKAAHKLKFLKSTLGCSESEAAIAVSMTPTILPLSEELLLRKIQFFIKEVGMEPQYIVERPVLLTQSLEKRLVPRHCVMKVLQAKGLLNSKMGFFTFVKIGEKTFK
Links
Other
mTERF
family TFs
Other
Panicum virgatum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J12304
Panicum virgatum
Pavir.J12304
N
0.806
Pavir.Db01642
Panicum virgatum
Pavir.Db01642
N
0.789
Pavir.Da01094
Panicum virgatum
Pavir.Da01094
N
0.784
Pavir.J16165
Panicum virgatum
Pavir.J16165
N
0.751
Pavir.J27712
Panicum virgatum
Pavir.J27712
N
0.739
Pavir.Da01422
Panicum virgatum
Pavir.Da01422
N
0.732
Pavir.Da01303
Panicum virgatum
Pavir.Da01303
N
0.726
Pavir.Da01092
Panicum virgatum
Pavir.Da01092
N
0.721
Pavir.Da01307
Panicum virgatum
Pavir.Da01307
N
0.711