CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Thhalv10022427m.g
(
Eutrema salsugineum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Thhalv10022427m.g
T265202_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10022427m
mTERF
60
417
LSLLTSYGFTDSQISRIISTYPRLLTLDAEKSLLPKLQALQSRGASSSELTEIVSKVPKILGKRGAKSTGLYYDFIKDIIHNDKDEEEEEEEEGYKSSKCEKICYSLPVGKKGNKIRNVSALRELGVPQRFLFTLLISKSQPVWGKEKFEESVKKVVDMGFDPTTSKFVQALHVVYEMSEKTIQDKVNVYKSLGFAEEEVWEIFNKWPYSLKFSERKITQTFETLKKCGLVEEEVLSVLKKRPECMRASEEKIVNCVETFLGLGFSGDEVVAMVKCFPTCFGLSAETVKKKTEFLVKEMNWSLKDVAAIPPVLGYSLEKRIVPRCNVIKALLSKGLIRGGKRNLPMSSVLTSSNKVFV
Links
Other
mTERF
family TFs
Other
Eutrema salsugineum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra039426
Brassica rapa
Bra039426
N
0.755
Bo5g145280
Brassica oleracea
Bo5g145280
N
0.752
Bostr.22157s0123
Boechera stricta
Bostr.22157s0123
I
0.735
Cagra.0043s0013
Capsella grandiflora
Cagra.0043s0013
N
0.704
Bostr.18473s0264
Boechera stricta
Bostr.18473s0264
N
0.701