CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10023457m.g
(
Eutrema salsugineum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Thhalv10023457m.g
T265205_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10023457m
mTERF
92
434
LSLFRSYGFADSQISNIITGYPLLLIADAETSIGPKLQSLQSRGASTSELTEILSKVPKILGKDRSFSVYYDFVKEIVEADKSSKYVKLCHSLPQGSKQENKLRNVSALRELGMPQKLLFSMLVSKCPHICGKERFEESLKKVVEMGFDPTTPKFLEALRIVQALKEETIEEKVNVYKSLGFAVEDVWAIFKKFPIFLTFSEKKITQTFETMKRCGLLEDEVRLVVKKFPQCIGISEQNILNSIEAFLGLGFTRDDIAMMVKRNPGCIGYSVETVKKKTEFVVKKMKWPLKAVASYPSVLGYSMEKRIVPRCNVIKALMSKRLIGRELPSMSSVLVCTDQTFL
Links
Other
mTERF
family TFs
Other
Eutrema salsugineum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra027041
Brassica rapa
Bra027041
N
0.742
Thhalv10023868m.g
Eutrema salsugineum
Thhalv10023868m.g
N
0.734
Bo9g037270
Brassica oleracea
Bo9g037270
N
0.731
Thhalv10023838m.g
Eutrema salsugineum
Thhalv10023838m.g
N
0.728
Bo01960s010
Brassica oleracea
Bo01960s010
N
0.722
Bo6g106640
Brassica oleracea
Bo6g106640
N
0.722
Bostr.22157s0123
Boechera stricta
Bostr.22157s0123
I
0.721
Bra036659
Brassica rapa
Bra036659
N
0.716
Bostr.22157s0159
Boechera stricta
Bostr.22157s0159
N
0.714
AT1G62085
Arabidopsis thaliana
AT1G62085
N
0.707
scaffold_200344.1
Arabidopsis lyrata
scaffold_200344.1
N
0.706
Bo9g040760
Brassica oleracea
Bo9g040760
N
0.703