Bo6g035910 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo6g035910 T267414_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PHL6
M02295_2.00 		Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN		 PBM
Weirauch et al.(2014)
pTH7071 		0.729 0.766
PHL6
M07083_2.00 		Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN		 Dap-seq
OMalley et al.(2016)
At3g13040_col_b 		0.729 0.766
PHR1
M02329_2.00 		Oryza sativa
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7755 		0.713 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g035910.1 Myb 197 248

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

174 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra038033 Brassica rapa Bra038033 I 0.870
Ciclev10030185m.g Citrus clementina Ciclev10030185m.g I 0.778
Gorai.009G120900 Gossypium raimondii Gorai.009G120900 I 0.778
TCM_027630 Theobroma cacao TCM_027630 I 0.778
orange1.1g011006m.g Citrus sinensis orange1.1g011006m.g I 0.778
OB03G25800 Oryza brachyantha OB03G25800 I 0.762
LPERR03G14050 Leersia perrieri LPERR03G14050 I 0.762
cassava35980.valid.m1 Manihot esculenta cassava35980.valid.m1 I 0.762
cassava35979.valid.m1 Manihot esculenta cassava35979.valid.m1 I 0.762
cassava39270.m1 Manihot esculenta cassava39270.m1 I 0.762
BRADI1G63530 Brachypodium distachyon BRADI1G63530 I 0.751
PRUPE_ppa023008mg Prunus persica PRUPE_ppa023008mg I 0.732
MDP0000241055 Malus domestica MDP0000241055 I 0.732
MDP0000773970 Malus domestica MDP0000773970 I 0.732
Cla006047 Citrullus lanatus Cla006047 I 0.732
Cucsa.037070 Cucumis sativus Cucsa.037070 I 0.732
Solyc09g072830.2 Solanum lycopersicum Solyc09g072830.2 I 0.731
evm.TU.supercontig_10.14 Carica papaya evm.TU.supercontig_10.14 I 0.729
PHL6 Arabidopsis thaliana AT3G13040 D 0.729
Gorai.011G001500 Gossypium raimondii Gorai.011G001500 I 0.729
Traes_4AS_7220D33B3 Triticum aestivum Traes_4AS_7220D33B3 I 0.720
VIT_09s0054g01620 Vitis vinifera VIT_09s0054g01620 I 0.720
F775_09615 Aegilops tauschii F775_09615 I 0.720
Traes_4DL_2C27C34AF Triticum aestivum Traes_4DL_2C27C34AF I 0.720
Lus10037296.g Linum usitatissimum Lus10037296.g I 0.720
MLOC_5585 Hordeum vulgare MLOC_5585 I 0.720
fgenesh2_kg.3__1373__AT3G13040.1 Arabidopsis lyrata fgenesh2_kg.3__1373__AT3G13040.1 I 0.714
SapurV1A.0703s0050 Salix purpurea SapurV1A.0703s0050 I 0.713
Solyc06g008200.2 Solanum lycopersicum Solyc06g008200.2 I 0.713
OLONG_010553 Oryza longistaminata OLONG_010553 I 0.713
ONIVA03G17050 Oryza nivara ONIVA03G17050 I 0.713
PK01823.1 Cannabis sativa PK01823.1 I 0.713
OPUNC03G15590 Oryza punctata OPUNC03G15590 I 0.713
ORUFI02G38560 Oryza rufipogon ORUFI02G38560 I 0.713
PHR1 Oryza sativa OS03G0329900 D 0.713
ORGLA03G0154000 Oryza glaberrima ORGLA03G0154000 I 0.713
PRUPE_ppa005159mg Prunus persica PRUPE_ppa005159mg I 0.713
OMERI03G14370 Oryza meridionalis OMERI03G14370 I 0.713
Pm013132 Prunus mume Pm013132 I 0.713
Eucgr.A01323 Eucalyptus grandis Eucgr.A01323 I 0.713
Aquca_017_00793 Aquilegia coerulea Aquca_017_00793 I 0.713
Eucgr.F04055 Eucalyptus grandis Eucgr.F04055 I 0.713
Lus10035705.g Linum usitatissimum Lus10035705.g I 0.713
gene05518-v1.0-hybrid Fragaria vesca gene05518-v1.0-hybrid I 0.713
evm.TU.supercontig_87.3 Carica papaya evm.TU.supercontig_87.3 I 0.713
mgf005047m Mimulus guttatus mgf005047m I 0.713
Cucsa.027530 Cucumis sativus Cucsa.027530 I 0.713
Cla003565 Citrullus lanatus Cla003565 I 0.713
TRIUR3_02291 Triticum urartu TRIUR3_02291 I 0.713
29680.m001711 Ricinus communis 29680.m001711 I 0.713
cassava22661.valid.m1 Manihot esculenta cassava22661.valid.m1 I 0.713
cassava44101.valid.m1 Manihot esculenta cassava44101.valid.m1 I 0.713
OLONG_005622 Oryza longistaminata OLONG_005622 I 0.713
Traes_6BL_5D8EE6802 Triticum aestivum Traes_6BL_5D8EE6802 I 0.713
POPTR_0007s15110 Populus trichocarpa POPTR_0007s15110 I 0.713
OB02G43730 Oryza brachyantha OB02G43730 I 0.713
BGIOSGA005373 Oryza indica BGIOSGA005373 I 0.713
PHR1 Oryza indica BGIOSGA012553 I 0.713
AMTR_s00048p00192390 Amborella trichopoda AMTR_s00048p00192390 I 0.710
PDK_20s1462141g001 Phoenix dactylifera PDK_20s1462141g001 I 0.709
PHR3 Oryza indica BGIOSGA007162 I 0.708
OPUNC02G02530 Oryza punctata OPUNC02G02530 I 0.708
ORGLA02G0030200 Oryza glaberrima ORGLA02G0030200 I 0.708
ORUFI02G03130 Oryza rufipogon ORUFI02G03130 I 0.708
PHR3 Oryza sativa OS02G0139000 I 0.708
OBART02G03200 Oryza barthii OBART02G03200 I 0.708
OGLUM02G03100 Oryza glumaepatula OGLUM02G03100 I 0.708
ONIVA02G03010 Oryza nivara ONIVA02G03010 I 0.708
OMERI02G03860 Oryza meridionalis OMERI02G03860 I 0.708
GSMUA_Achr5G12960_001 Musa acuminata GSMUA_Achr5G12960_001 I 0.702
GRMZM2G006477 Zea mays GRMZM2G006477 I 0.702
GSMUA_Achr8G12580_001 Musa acuminata GSMUA_Achr8G12580_001 I 0.702
AMTR_s00025p00224230 Amborella trichopoda AMTR_s00025p00224230 I 0.702
Si035682m.g Setaria italica Si035682m.g I 0.702
Pavir.J39104 Panicum virgatum Pavir.J39104 I 0.702
Sb01g036440 Sorghum bicolor Sb01g036440 I 0.702
Solyc04g050070.1 Solanum lycopersicum Solyc04g050070.1 I 0.702
AMTR_s00142p00049490 Amborella trichopoda AMTR_s00142p00049490 I 0.702
Pavir.Ia03429 Panicum virgatum Pavir.Ia03429 I 0.702
Sb10g029200 Sorghum bicolor Sb10g029200 I 0.701
Si017191m.g Setaria italica Si017191m.g I 0.695
Si006354m.g Setaria italica Si006354m.g I 0.695
Traes_7AL_D45376F32 Triticum aestivum Traes_7AL_D45376F32 I 0.695
MLOC_54829 Hordeum vulgare MLOC_54829 I 0.695
BRADI1G34470 Brachypodium distachyon BRADI1G34470 I 0.695
Pavir.Db00228 Panicum virgatum Pavir.Db00228 I 0.695
Pavir.J14911 Panicum virgatum Pavir.J14911 I 0.695
Pavir.J27649 Panicum virgatum Pavir.J27649 I 0.695
Pavir.Aa03223 Panicum virgatum Pavir.Aa03223 I 0.695
BGIOSGA023563 Oryza indica BGIOSGA023563 I 0.695
Traes_7DL_090D0E08E Triticum aestivum Traes_7DL_090D0E08E I 0.695
F775_29452 Aegilops tauschii F775_29452 I 0.695
Traes_7BL_09DD5A1DC Triticum aestivum Traes_7BL_09DD5A1DC I 0.695
TRIUR3_32904 Triticum urartu TRIUR3_32904 I 0.695
ORGLA06G0222600 Oryza glaberrima ORGLA06G0222600 I 0.695
OB06G34350 Oryza brachyantha OB06G34350 I 0.695
OS06G0703900 Oryza sativa OS06G0703900 I 0.695
mgf011847m Mimulus guttatus mgf011847m I 0.694
GSMUA_Achr4G30200_001 Musa acuminata GSMUA_Achr4G30200_001 I 0.694
Bra001484 Brassica rapa Bra001484 I 0.692
Bra039364 Brassica rapa Bra039364 I 0.692
30169.m006598 Ricinus communis 30169.m006598 I 0.692
TCM_039819 Theobroma cacao TCM_039819 I 0.692
29701.m000580 Ricinus communis 29701.m000580 I 0.692
PGSC0003DMG400023467 Solanum tuberosum PGSC0003DMG400023467 I 0.692
gene18340-v1.0-hybrid Fragaria vesca gene18340-v1.0-hybrid I 0.692
Solyc05g055940.2 Solanum lycopersicum Solyc05g055940.2 I 0.692
Bo1g138650 Brassica oleracea Bo1g138650 I 0.692
Bo3g065290 Brassica oleracea Bo3g065290 I 0.692
PDK_20s1306081g005 Phoenix dactylifera PDK_20s1306081g005 I 0.691
GSMUA_Achr11G02560_001 Musa acuminata GSMUA_Achr11G02560_001 I 0.691
Cagra.5641s0065 Capsella grandiflora Cagra.5641s0065 I 0.686
Carubv10013698m.g Capsella rubella Carubv10013698m.g I 0.686
Bostr.3640s0078 Boechera stricta Bostr.3640s0078 I 0.686
GRMZM2G010920 Zea mays GRMZM2G010920 I 0.686
fgenesh1_pg.scaffold_143000021 Physcomitrella patens fgenesh1_pg.scaffold_143000021 I 0.685
fgenesh1_pg.scaffold_391000034 Physcomitrella patens fgenesh1_pg.scaffold_391000034 I 0.685
POPTR_0014s00280 Populus trichocarpa POPTR_0014s00280 I 0.685
VIT_09s0070g00410 Vitis vinifera VIT_09s0070g00410 I 0.684
Solyc04g008480.1 Solanum lycopersicum Solyc04g008480.1 I 0.684
PGSC0003DMG400029440 Solanum tuberosum PGSC0003DMG400029440 I 0.684
GRMZM2G125704 Zea mays GRMZM2G125704 I 0.682
LPERR02G30520 Leersia perrieri LPERR02G30520 I 0.682
GRMZM2G374986 Zea mays GRMZM2G374986 I 0.681
Traes_7DL_999E12D5D Triticum aestivum Traes_7DL_999E12D5D I 0.681
F775_07476 Aegilops tauschii F775_07476 I 0.681
Traes_7BL_F20FD5D20 Triticum aestivum Traes_7BL_F20FD5D20 I 0.681
estExt_fgenesh1_pg.C_2260017 Physcomitrella patens estExt_fgenesh1_pg.C_2260017 I 0.679
PDK_20s1523411g004 Phoenix dactylifera PDK_20s1523411g004 I 0.679
estExt_fgenesh1_pg.C_2690029 Physcomitrella patens estExt_fgenesh1_pg.C_2690029 I 0.679
GSMUA_Achr10G23260_001 Musa acuminata GSMUA_Achr10G23260_001 I 0.679
LPERR02G03030 Leersia perrieri LPERR02G03030 I 0.674
OB02G12880 Oryza brachyantha OB02G12880 I 0.674
Gorai.004G023100 Gossypium raimondii Gorai.004G023100 I 0.673
BRADI3G03538 Brachypodium distachyon BRADI3G03538 I 0.673
gene13545-v1.0-hybrid Fragaria vesca gene13545-v1.0-hybrid I 0.671
VIT_02s0033g00300 Vitis vinifera VIT_02s0033g00300 I 0.671
PRUPE_ppa009898mg Prunus persica PRUPE_ppa009898mg I 0.671
GSMUA_Achr7G15740_001 Musa acuminata GSMUA_Achr7G15740_001 I 0.671
GSMUA_Achr11G06340_001 Musa acuminata GSMUA_Achr11G06340_001 I 0.671
GSMUA_Achr6G01310_001 Musa acuminata GSMUA_Achr6G01310_001 I 0.671
Pm023092 Prunus mume Pm023092 I 0.671
MLOC_65279 Hordeum vulgare MLOC_65279 I 0.667
Eucgr.D01346 Eucalyptus grandis Eucgr.D01346 I 0.667
OMERI10G13750 Oryza meridionalis OMERI10G13750 I 0.666
OB10G24340 Oryza brachyantha OB10G24340 I 0.666
ONIVA03G01980 Oryza nivara ONIVA03G01980 I 0.666
OPUNC03G02160 Oryza punctata OPUNC03G02160 I 0.666
ONIVA10G19340 Oryza nivara ONIVA10G19340 I 0.666
OLONG_011732 Oryza longistaminata OLONG_011732 I 0.666
OBART10G17270 Oryza barthii OBART10G17270 I 0.666
OLONG_004539 Oryza longistaminata OLONG_004539 I 0.666
OPUNC10G15550 Oryza punctata OPUNC10G15550 I 0.666
OMERI03G02220 Oryza meridionalis OMERI03G02220 I 0.666
Pavir.Ib00180 Panicum virgatum Pavir.Ib00180 I 0.666
OBART03G02370 Oryza barthii OBART03G02370 I 0.666
Pavir.Ia04483 Panicum virgatum Pavir.Ia04483 I 0.666
BGIOSGA031479 Oryza indica BGIOSGA031479 I 0.666
ORUFI10G18320 Oryza rufipogon ORUFI10G18320 I 0.666
GSMUA_AchrUn_randomG06480_001 Musa acuminata GSMUA_AchrUn_randomG06480_001 I 0.666
OGLUM03G02310 Oryza glumaepatula OGLUM03G02310 I 0.666
ORUFI03G02110 Oryza rufipogon ORUFI03G02110 I 0.666
ORGLA10G0122800 Oryza glaberrima ORGLA10G0122800 I 0.666
BGIOSGA011527 Oryza indica BGIOSGA011527 I 0.666
OB03G12320 Oryza brachyantha OB03G12320 I 0.666
Si036127m.g Setaria italica Si036127m.g I 0.666
ORGLA03G0021400 Oryza glaberrima ORGLA03G0021400 I 0.666
LPERR03G02180 Leersia perrieri LPERR03G02180 I 0.666
Sb01g048420 Sorghum bicolor Sb01g048420 I 0.666
GRMZM5G887276 Zea mays GRMZM5G887276 I 0.666
LPERR10G13190 Leersia perrieri LPERR10G13190 I 0.666
AMTR_s00026p00153500 Amborella trichopoda AMTR_s00026p00153500 I 0.665
Aquca_034_00282 Aquilegia coerulea Aquca_034_00282 I 0.662
SapurV1A.0145s0130 Salix purpurea SapurV1A.0145s0130 I 0.661