fgenesh2_kg.6__2781__AT5G28300.1 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh2_kg.6__2781__AT5G28300.1 T270819_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G28300
M00880_2.00 		Arabidopsis thaliana
NNNNRCNN
NNGYNNNN		 PBM
Franco-Zorrilla et al.(2014)
At5g28300 		0.820 0.897
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.6__2781__AT5G28300.1 Myb 476 513

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G28300 Arabidopsis thaliana AT5G28300 D 0.820
OLONG_014459 Oryza longistaminata OLONG_014459 I 0.681