CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GLYMA18G50891
(
Glycine max
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GLYMA18G50891
T271758_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATMYB121
M07091_2.00
Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN
Dap-seq
OMalley et al.(2016)
MYB121_col_a
0.776
0.785
MYB116
M07014_2.00
Arabidopsis thaliana
NRCCTAAYTWNWNNN
NNNWNWARTTAGGYN
Dap-seq
OMalley et al.(2016)
MYB116_col_a
0.694
0.688
MYB116
M07015_2.00
Arabidopsis thaliana
HNTRCCTAACTHH
DDAGTTAGGYAND
Dap-seq
OMalley et al.(2016)
MYB116_colamp_a
0.694
0.688
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.673
0.688
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.673
0.688
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA18G50891.1
Myb
16
63
KGPWTGEEDKLLSEYVCFNGEGRWSSVAQCTGLKRNGKSCRLRWVNYL
GLYMA18G50891.1
Myb
69
114
RGQLTPIEVGIIIELHAIFGNKWSTIAKYLPGRTDNDIKNYWRTHF
Links
Other
Myb/SANT
family TFs
Other
Glycine max
TFs
203 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mgf002201m
Mimulus guttatus
mgf002201m
I
0.808
Lus10005079.g
Linum usitatissimum
Lus10005079.g
I
0.807
Gorai.001G090100
Gossypium raimondii
Gorai.001G090100
I
0.797
POPTR_0004s11720
Populus trichocarpa
POPTR_0004s11720
I
0.787
Solyc05g053150.1
Solanum lycopersicum
Solyc05g053150.1
I
0.782
GLYMA18G50881
Glycine max
GLYMA18G50881
I
0.782
ATMYB121
Arabidopsis lyrata
fgenesh2_kg.5__710__AT3G30210.1
I
0.782
Bra025410
Brassica rapa
Bra025410
I
0.779
PGSC0003DMG400027202
Solanum tuberosum
PGSC0003DMG400027202
I
0.778
Eucgr.I02057
Eucalyptus grandis
Eucgr.I02057
I
0.778
cassava9891.m1
Manihot esculenta
cassava9891.m1
I
0.777
Bo7g088650
Brassica oleracea
Bo7g088650
I
0.776
ATMYB121
Arabidopsis thaliana
AT3G30210
D
0.776
Carubv10018530m.g
Capsella rubella
Carubv10018530m.g
I
0.776
Bostr.0556s0619
Boechera stricta
Bostr.0556s0619
I
0.776
Cagra.1138s0003
Capsella grandiflora
Cagra.1138s0003
I
0.776
POPTR_0017s13370
Populus trichocarpa
POPTR_0017s13370
I
0.774
Pm015392
Prunus mume
Pm015392
I
0.772
Lus10034372.g
Linum usitatissimum
Lus10034372.g
I
0.772
Solyc02g089190.1
Solanum lycopersicum
Solyc02g089190.1
I
0.772
PRUPE_ppa016385mg
Prunus persica
PRUPE_ppa016385mg
I
0.772
PGSC0003DMG400001376
Solanum tuberosum
PGSC0003DMG400001376
I
0.772
Gorai.001G207500
Gossypium raimondii
Gorai.001G207500
I
0.770
Bo9g009020
Brassica oleracea
Bo9g009020
I
0.767
SapurV1A.0323s0160
Salix purpurea
SapurV1A.0323s0160
I
0.767
Ca_20437
Cicer arietinum
Ca_20437
I
0.765
TCM_018971
Theobroma cacao
TCM_018971
I
0.765
GLYMA20G34140
Glycine max
GLYMA20G34140
I
0.762
GLYMA04G26650
Glycine max
GLYMA04G26650
I
0.762
GLYMA06G38340
Glycine max
GLYMA06G38340
I
0.762
ATMYB121
Vitis vinifera
VIT_14s0083g01060
I
0.760
Ciclev10013466m.g
Citrus clementina
Ciclev10013466m.g
I
0.759
orange1.1g047854m.g
Citrus sinensis
orange1.1g047854m.g
I
0.759
Cla016762
Citrullus lanatus
Cla016762
I
0.758
Cucsa.238540
Cucumis sativus
Cucsa.238540
I
0.758
MDP0000286143
Malus domestica
MDP0000286143
I
0.757
POPTR_0004s11460
Populus trichocarpa
POPTR_0004s11460
I
0.755
Thhalv10005370m.g
Eutrema salsugineum
Thhalv10005370m.g
I
0.755
Gorai.005G054900
Gossypium raimondii
Gorai.005G054900
I
0.755
evm.TU.supercontig_14.220
Carica papaya
evm.TU.supercontig_14.220
I
0.754
Gorai.006G254200
Gossypium raimondii
Gorai.006G254200
I
0.752
mgf004640m
Mimulus guttatus
mgf004640m
I
0.752
Lus10023711.g
Linum usitatissimum
Lus10023711.g
I
0.747
MTR_1g045610
Medicago truncatula
MTR_1g045610
I
0.747
Carubv10007255m.g
Capsella rubella
Carubv10007255m.g
I
0.746
Cagra.15509s0001
Capsella grandiflora
Cagra.15509s0001
I
0.746
GLYMA10G33450
Glycine max
GLYMA10G33450
I
0.746
GLYMA15G14190
Glycine max
GLYMA15G14190
I
0.745
Bra036202
Brassica rapa
Bra036202
I
0.744
TCM_021037
Theobroma cacao
TCM_021037
I
0.743
Bo3g083130
Brassica oleracea
Bo3g083130
I
0.743
MDP0000183451
Malus domestica
MDP0000183451
I
0.743
Bra028369
Brassica rapa
Bra028369
I
0.743
MYB305
Arabidopsis thaliana
AT3G24310
I
0.743
Bo7g033260
Brassica oleracea
Bo7g033260
I
0.743
POPTR_0010s07450
Populus trichocarpa
POPTR_0010s07450
I
0.743
MDP0000133412
Malus domestica
MDP0000133412
I
0.743
Bra015029
Brassica rapa
Bra015029
I
0.743
PRUPE_ppa017942mg
Prunus persica
PRUPE_ppa017942mg
I
0.743
Bra001941
Brassica rapa
Bra001941
I
0.743
PRUPE_ppa024234mg
Prunus persica
PRUPE_ppa024234mg
I
0.743
Carubv10014367m.g
Capsella rubella
Carubv10014367m.g
I
0.743
evm.TU.supercontig_59.23
Carica papaya
evm.TU.supercontig_59.23
I
0.743
Gorai.006G073500
Gossypium raimondii
Gorai.006G073500
I
0.743
Cucsa.255900
Cucumis sativus
Cucsa.255900
I
0.743
cassava24389.valid.m1
Manihot esculenta
cassava24389.valid.m1
I
0.743
GLYMA17G17560
Glycine max
GLYMA17G17560
I
0.743
GLYMA10G26681
Glycine max
GLYMA10G26681
I
0.743
Bostr.2021s0106
Boechera stricta
Bostr.2021s0106
I
0.743
fgenesh2_kg.3__2645__AT3G24310.1
Arabidopsis lyrata
fgenesh2_kg.3__2645__AT3G24310.1
I
0.743
Bostr.19424s0195
Boechera stricta
Bostr.19424s0195
I
0.743
Cagra.0454s0003
Capsella grandiflora
Cagra.0454s0003
I
0.743
Bo1g098860
Brassica oleracea
Bo1g098860
I
0.743
gene28293-v1.0-hybrid
Fragaria vesca
gene28293-v1.0-hybrid
I
0.743
Pm009050
Prunus mume
Pm009050
I
0.743
Cla021798
Citrullus lanatus
Cla021798
I
0.743
SapurV1A.0096s0360
Salix purpurea
SapurV1A.0096s0360
I
0.743
Thhalv10002634m.g
Eutrema salsugineum
Thhalv10002634m.g
I
0.743
Solyc09g090790.2
Solanum lycopersicum
Solyc09g090790.2
I
0.742
PGSC0003DMG400001504
Solanum tuberosum
PGSC0003DMG400001504
I
0.742
Aquca_002_00902
Aquilegia coerulea
Aquca_002_00902
I
0.740
AtMYB79
Arabidopsis thaliana
AT4G13480
I
0.738
fgenesh2_kg.9__1__AT4G13480.1
Arabidopsis lyrata
fgenesh2_kg.9__1__AT4G13480.1
I
0.738
Cla007745
Citrullus lanatus
Cla007745
I
0.737
Cucsa.383230
Cucumis sativus
Cucsa.383230
I
0.737
VIT_05s0049g02260
Vitis vinifera
VIT_05s0049g02260
I
0.737
Ciclev10006914m.g
Citrus clementina
Ciclev10006914m.g
I
0.737
orange1.1g047839m.g
Citrus sinensis
orange1.1g047839m.g
I
0.737
Ca_07872
Cicer arietinum
Ca_07872
I
0.735
Eucgr.H02896
Eucalyptus grandis
Eucgr.H02896
I
0.732
Bra020744
Brassica rapa
Bra020744
I
0.728
GLYMA20G20980
Glycine max
GLYMA20G20980
I
0.726
GLYMA08G27660
Glycine max
GLYMA08G27660
I
0.725
Lus10014453.g
Linum usitatissimum
Lus10014453.g
I
0.723
cassava24463.valid.m1
Manihot esculenta
cassava24463.valid.m1
I
0.721
OBART02G24300
Oryza barthii
OBART02G24300
I
0.715
Pavir.J37992
Panicum virgatum
Pavir.J37992
I
0.715
OMERI02G23750
Oryza meridionalis
OMERI02G23750
I
0.715
OB02G31640
Oryza brachyantha
OB02G31640
I
0.715
BGIOSGA006030
Oryza indica
BGIOSGA006030
I
0.715
MLOC_6786
Hordeum vulgare
MLOC_6786
I
0.715
GRMZM2G043792
Zea mays
GRMZM2G043792
I
0.715
GRMZM2G027697
Zea mays
GRMZM2G027697
I
0.715
ONIVA09G12460
Oryza nivara
ONIVA09G12460
I
0.715
Traes_6BL_8E4A831B6
Triticum aestivum
Traes_6BL_8E4A831B6
I
0.715
ORGLA02G0210000
Oryza glaberrima
ORGLA02G0210000
I
0.715
Pavir.Aa01294
Panicum virgatum
Pavir.Aa01294
I
0.715
ORUFI02G25650
Oryza rufipogon
ORUFI02G25650
I
0.715
OPUNC02G22200
Oryza punctata
OPUNC02G22200
I
0.715
Sb04g026210
Sorghum bicolor
Sb04g026210
I
0.715
OS02G0618400
Oryza sativa
OS02G0618400
I
0.715
Si018007m.g
Setaria italica
Si018007m.g
I
0.715
Si010822m.g
Setaria italica
Si010822m.g
I
0.714
Pavir.Ga01308
Panicum virgatum
Pavir.Ga01308
I
0.714
MTR_1g073170
Medicago truncatula
MTR_1g073170
I
0.713
Aquca_025_00059
Aquilegia coerulea
Aquca_025_00059
I
0.712
Thhalv10026896m.g
Eutrema salsugineum
Thhalv10026896m.g
I
0.707
OGLUM02G24660
Oryza glumaepatula
OGLUM02G24660
I
0.706
LPERR04G14700
Leersia perrieri
LPERR04G14700
I
0.705
ORUFI04G19690
Oryza rufipogon
ORUFI04G19690
I
0.705
BGIOSGA014750
Oryza indica
BGIOSGA014750
I
0.705
POPTR_0008s17350
Populus trichocarpa
POPTR_0008s17350
I
0.705
ORGLA04G0153500
Oryza glaberrima
ORGLA04G0153500
I
0.705
OB04G25360
Oryza brachyantha
OB04G25360
I
0.705
OS04G0508500
Oryza sativa
OS04G0508500
I
0.705
Bostr.12659s0423
Boechera stricta
Bostr.12659s0423
I
0.699
Cagra.2231s0026
Capsella grandiflora
Cagra.2231s0026
I
0.699
chr1.CM0163.50.nc
Lotus japonicus
chr1.CM0163.50.nc
I
0.698
MYB116
Arabidopsis thaliana
AT1G25340
D
0.694
GSMUA_Achr1G21020_001
Musa acuminata
GSMUA_Achr1G21020_001
I
0.692
AMTR_s00039p00172240
Amborella trichopoda
AMTR_s00039p00172240
I
0.689
Cagra.1111s0025
Capsella grandiflora
Cagra.1111s0025
I
0.684
Carubv10021411m.g
Capsella rubella
Carubv10021411m.g
I
0.684
GSMUA_Achr4G29230_001
Musa acuminata
GSMUA_Achr4G29230_001
I
0.683
Aquca_003_00309
Aquilegia coerulea
Aquca_003_00309
I
0.683
GLYMA08G04670
Glycine max
GLYMA08G04670
I
0.682
GLYMA05G35050
Glycine max
GLYMA05G35050
I
0.682
TRIUR3_18020
Triticum urartu
TRIUR3_18020
I
0.679
Traes_2AL_605C25CDF
Triticum aestivum
Traes_2AL_605C25CDF
I
0.679
F775_06959
Aegilops tauschii
F775_06959
I
0.679
SapurV1A.0021s0310
Salix purpurea
SapurV1A.0021s0310
I
0.677
Bo7g050560
Brassica oleracea
Bo7g050560
I
0.675
Bra012482
Brassica rapa
Bra012482
I
0.675
Bra033948
Brassica rapa
Bra033948
I
0.674
Bostr.26959s0063
Boechera stricta
Bostr.26959s0063
I
0.673
MYB62
Arabidopsis thaliana
AT1G68320
D
0.673
Bo6g106730
Brassica oleracea
Bo6g106730
I
0.673
Bra004297
Brassica rapa
Bra004297
I
0.673
Solyc03g119370.1
Solanum lycopersicum
Solyc03g119370.1
I
0.673
Thhalv10018962m.g
Eutrema salsugineum
Thhalv10018962m.g
I
0.673
PGSC0003DMG400005641
Solanum tuberosum
PGSC0003DMG400005641
I
0.673
GSMUA_Achr3G01370_001
Musa acuminata
GSMUA_Achr3G01370_001
I
0.673
Bo2g057760
Brassica oleracea
Bo2g057760
I
0.673
MYB62
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2001171
I
0.673
F775_23572
Aegilops tauschii
F775_23572
I
0.671
TRIUR3_31527
Triticum urartu
TRIUR3_31527
I
0.671
Traes_6DL_FDFCBA57D
Triticum aestivum
Traes_6DL_FDFCBA57D
I
0.671
Traes_6DL_FDFCBA57D1
Triticum aestivum
Traes_6DL_FDFCBA57D1
I
0.671
Traes_6AL_89BA7115C
Triticum aestivum
Traes_6AL_89BA7115C
I
0.671
MDP0000823458
Malus domestica
MDP0000823458
I
0.668
GSMUA_Achr1G03450_001
Musa acuminata
GSMUA_Achr1G03450_001
I
0.668
GSMUA_Achr6G09760_001
Musa acuminata
GSMUA_Achr6G09760_001
I
0.667
Lus10041435.g
Linum usitatissimum
Lus10041435.g
I
0.667
Pavir.J39490
Panicum virgatum
Pavir.J39490
I
0.666
Sb01g037110
Sorghum bicolor
Sb01g037110
I
0.666
Si035722m.g
Setaria italica
Si035722m.g
I
0.666
Pavir.J28445
Panicum virgatum
Pavir.J28445
I
0.666
Bo6g097180
Brassica oleracea
Bo6g097180
I
0.665
Bra004041
Brassica rapa
Bra004041
I
0.665
Pavir.Ea00660
Panicum virgatum
Pavir.Ea00660
I
0.664
SapurV1A.0078s0260
Salix purpurea
SapurV1A.0078s0260
I
0.664
Pavir.Eb00654
Panicum virgatum
Pavir.Eb00654
I
0.664
orange1.1g021188m.g
Citrus sinensis
orange1.1g021188m.g
I
0.664
Sb03g007360
Sorghum bicolor
Sb03g007360
I
0.664
OBART01G01830
Oryza barthii
OBART01G01830
I
0.664
OB01G11750
Oryza brachyantha
OB01G11750
I
0.664
OGLUM01G02010
Oryza glumaepatula
OGLUM01G02010
I
0.664
OLONG_008024
Oryza longistaminata
OLONG_008024
I
0.664
ONIVA01G01990
Oryza nivara
ONIVA01G01990
I
0.664
OMERI01G01310
Oryza meridionalis
OMERI01G01310
I
0.664
LPERR01G01750
Leersia perrieri
LPERR01G01750
I
0.664
GSMUA_AchrUn_randomG27010_001
Musa acuminata
GSMUA_AchrUn_randomG27010_001
I
0.664
GRMZM2G096358
Zea mays
GRMZM2G096358
I
0.664
BGIOSGA002469
Oryza indica
BGIOSGA002469
I
0.664
GRMZM2G162709
Zea mays
GRMZM2G162709
I
0.664
GSMUA_Achr10G19840_001
Musa acuminata
GSMUA_Achr10G19840_001
I
0.664
GSMUA_Achr3G21060_001
Musa acuminata
GSMUA_Achr3G21060_001
I
0.664
Gorai.002G218600
Gossypium raimondii
Gorai.002G218600
I
0.664
ORGLA01G0016500
Oryza glaberrima
ORGLA01G0016500
I
0.664
ORUFI01G01910
Oryza rufipogon
ORUFI01G01910
I
0.664
VIT_01s0011g03730
Vitis vinifera
VIT_01s0011g03730
I
0.664
Ciclev10015986m.g
Citrus clementina
Ciclev10015986m.g
I
0.664
evm.TU.supercontig_798.1
Carica papaya
evm.TU.supercontig_798.1
I
0.664
Solyc05g009230.1
Solanum lycopersicum
Solyc05g009230.1
I
0.664
TCM_009642
Theobroma cacao
TCM_009642
I
0.664
OS01G0128000
Oryza sativa
OS01G0128000
I
0.664
PGSC0003DMG400014550
Solanum tuberosum
PGSC0003DMG400014550
I
0.664
POPTR_0010s13290
Populus trichocarpa
POPTR_0010s13290
I
0.664
evm.TU.supercontig_145.21
Carica papaya
evm.TU.supercontig_145.21
I
0.663
Ciclev10021479m.g
Citrus clementina
Ciclev10021479m.g
I
0.663
orange1.1g043269m.g
Citrus sinensis
orange1.1g043269m.g
I
0.663
Lus10034338.g
Linum usitatissimum
Lus10034338.g
I
0.662
GSMUA_Achr2G22640_001
Musa acuminata
GSMUA_Achr2G22640_001
I
0.661