CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA03G21580
(
Oryza nivara
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
ONIVA03G21580
T276253_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB92
M07123_2.00
Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN
Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b
0.704
0.774
MYB92
M07124_2.00
Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN
Dap-seq
OMalley et al.(2016)
MYB92_colamp_a
0.704
0.774
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA03G21580.1
Myb
16
64
KGPWTREEDEKLVAYVDQHGGHGSWRSLPKRAGLNRCCKSCRLRWINYL
ONIVA03G21580.1
Myb
70
115
RGNFTPEEEQAIITLHSVLGNKWSTIATRLPGRTDNEIKNYWNTRL
Links
Other
Myb/SANT
family TFs
Other
Oryza nivara
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM03G20500
Oryza glumaepatula
OGLUM03G20500
I
0.909
OMERI03G17860
Oryza meridionalis
OMERI03G17860
I
0.909
ORGLA03G0186000
Oryza glaberrima
ORGLA03G0186000
I
0.909
ORUFI03G20530
Oryza rufipogon
ORUFI03G20530
I
0.909
OS03G0388600
Oryza sativa
OS03G0388600
I
0.909
BGIOSGA010612
Oryza indica
BGIOSGA010612
I
0.906
OPUNC03G18740
Oryza punctata
OPUNC03G18740
I
0.879
OB03G29100
Oryza brachyantha
OB03G29100
I
0.857
LPERR03G17070
Leersia perrieri
LPERR03G17070
I
0.818
Eucgr.F00325
Eucalyptus grandis
Eucgr.F00325
I
0.719
MYB92
Arabidopsis thaliana
AT5G10280
D
0.704
Bo2g009800
Brassica oleracea
Bo2g009800
I
0.704
Bra028593
Brassica rapa
Bra028593
I
0.704
MYB92
Arabidopsis lyrata
fgenesh2_kg.6__990__AT5G10280.1
I
0.704
Bostr.13175s0070
Boechera stricta
Bostr.13175s0070
I
0.704
Cagra.1085s0031
Capsella grandiflora
Cagra.1085s0031
I
0.704
Carubv10003148m.g
Capsella rubella
Carubv10003148m.g
I
0.704
Bo9g172290
Brassica oleracea
Bo9g172290
I
0.698
Bo3g005530
Brassica oleracea
Bo3g005530
I
0.696
GSMUA_Achr3G06470_001
Musa acuminata
GSMUA_Achr3G06470_001
I
0.695
Eucgr.K00077
Eucalyptus grandis
Eucgr.K00077
I
0.694
Thhalv10014028m.g
Eutrema salsugineum
Thhalv10014028m.g
I
0.687
OPUNC06G07380
Oryza punctata
OPUNC06G07380
I
0.685
gene12564-v1.0-hybrid
Fragaria vesca
gene12564-v1.0-hybrid
I
0.685
Bra006055
Brassica rapa
Bra006055
I
0.683
BRADI3G58770
Brachypodium distachyon
BRADI3G58770
I
0.681
F775_26732
Aegilops tauschii
F775_26732
I
0.681
MLOC_52134
Hordeum vulgare
MLOC_52134
I
0.681
Traes_6AL_2BA02CAA9
Triticum aestivum
Traes_6AL_2BA02CAA9
I
0.681
Traes_6AL_52227091B
Triticum aestivum
Traes_6AL_52227091B
I
0.681
Traes_6BL_0D6CD031E
Triticum aestivum
Traes_6BL_0D6CD031E
I
0.681
Traes_6BL_5A2DB8F78
Triticum aestivum
Traes_6BL_5A2DB8F78
I
0.681
Traes_6DL_499F64524
Triticum aestivum
Traes_6DL_499F64524
I
0.681
Traes_6DL_8BF29D46C
Triticum aestivum
Traes_6DL_8BF29D46C
I
0.681
TRIUR3_03772
Triticum urartu
TRIUR3_03772
I
0.681
TRIUR3_23397
Triticum urartu
TRIUR3_23397
I
0.681
Ciclev10020765m.g
Citrus clementina
Ciclev10020765m.g
I
0.677
orange1.1g039198m.g
Citrus sinensis
orange1.1g039198m.g
I
0.677
GRMZM2G017268
Zea mays
GRMZM2G017268
I
0.673
GRMZM2G110135
Zea mays
GRMZM2G110135
I
0.673
PRUPE_ppa019280mg
Prunus persica
PRUPE_ppa019280mg
I
0.673
Sb07g028990
Sorghum bicolor
Sb07g028990
I
0.673
Si017785m.g
Setaria italica
Si017785m.g
I
0.673
Pm023191
Prunus mume
Pm023191
I
0.673
Cucsa.338590
Cucumis sativus
Cucsa.338590
I
0.672
TCM_034902
Theobroma cacao
TCM_034902
I
0.671
GLYMA01G02070
Glycine max
GLYMA01G02070
I
0.670
GSMUA_Achr9G24560_001
Musa acuminata
GSMUA_Achr9G24560_001
I
0.669
MLOC_51960
Hordeum vulgare
MLOC_51960
I
0.669
Si014103m.g
Setaria italica
Si014103m.g
I
0.669
Traes_7AS_B8E8A2F55
Triticum aestivum
Traes_7AS_B8E8A2F55
I
0.669
TRIUR3_03304
Triticum urartu
TRIUR3_03304
I
0.669
POPTR_0019s07760
Populus trichocarpa
POPTR_0019s07760
I
0.668
cassava17115.m1
Manihot esculenta
cassava17115.m1
I
0.667
cassava44382.m1
Manihot esculenta
cassava44382.m1
I
0.667
gene02214-v1.0-hybrid
Fragaria vesca
gene02214-v1.0-hybrid
I
0.667
Gorai.009G236900
Gossypium raimondii
Gorai.009G236900
I
0.667
OBART02G32900
Oryza barthii
OBART02G32900
I
0.666
OGLUM02G33500
Oryza glumaepatula
OGLUM02G33500
I
0.666
OMERI02G31500
Oryza meridionalis
OMERI02G31500
I
0.666
ONIVA02G35050
Oryza nivara
ONIVA02G35050
I
0.666
OPUNC02G30360
Oryza punctata
OPUNC02G30360
I
0.666
ORGLA02G0284500
Oryza glaberrima
ORGLA02G0284500
I
0.666
ORUFI02G34560
Oryza rufipogon
ORUFI02G34560
I
0.666
cassava44907.m1
Manihot esculenta
cassava44907.m1
I
0.666
Cagra.0917s0061
Capsella grandiflora
Cagra.0917s0061
I
0.666
Carubv10026822m.g
Capsella rubella
Carubv10026822m.g
I
0.666
Thhalv10004620m.g
Eutrema salsugineum
Thhalv10004620m.g
I
0.666
PRUPE_ppa017039mg
Prunus persica
PRUPE_ppa017039mg
I
0.665
VIT_16s0039g01710
Vitis vinifera
VIT_16s0039g01710
I
0.665
Pm019588
Prunus mume
Pm019588
I
0.665
Pavir.Da02398
Panicum virgatum
Pavir.Da02398
I
0.665
MDP0000286526
Malus domestica
MDP0000286526
I
0.664
POPTR_0007s05360
Populus trichocarpa
POPTR_0007s05360
I
0.663
Gorai.008G179600
Gossypium raimondii
Gorai.008G179600
I
0.663
cassava4659.m1
Manihot esculenta
cassava4659.m1
I
0.662
Gorai.012G186500
Gossypium raimondii
Gorai.012G186500
I
0.662