CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OS08G0486300
(
Oryza sativa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
OS08G0486300
T277267_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATMYB63
M07039_2.00
Arabidopsis thaliana
NNNHNNHHYCACCWACCMMHN
NDKKGGTWGGTGRDDNNDNNN
Dap-seq
OMalley et al.(2016)
MYB63_col_a
0.668
0.629
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS08T0486300-00
Myb
14
51
KGPWTPEEDEKLLHYIQKNGHGSWRTLPRLAGTVLQSP
OS08T0486300-00
Myb
66
90
NSTAPELRSLNRCGKSCRLRWTNYL
OS08T0486300-00
Myb
96
141
RGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHL
Links
Other
Myb/SANT
family TFs
Other
Oryza sativa
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mgf025484m
Mimulus guttatus
mgf025484m
N
0.745
Gorai.001G169700
Gossypium raimondii
Gorai.001G169700
I
0.738
MDP0000132671
Malus domestica
MDP0000132671
N
0.713
MDP0000308403
Malus domestica
MDP0000308403
N
0.713
AMTR_s00006p00267240
Amborella trichopoda
AMTR_s00006p00267240
N
0.678
ATMYB63
Arabidopsis thaliana
AT1G79180
D
0.668