PGSC0003DMG400044858 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400044858 T277757_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400095287 Myb 3 49
PGSC0003DMT400095287 Myb 55 100

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc04g050000.1 Solanum lycopersicum Solyc04g050000.1 N 0.755
PGSC0003DMG400034577 Solanum tuberosum PGSC0003DMG400034577 N 0.713
GLYMA02G43280 Glycine max GLYMA02G43280 I 0.697
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I 0.692
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.683
GLYMA14G06320 Glycine max GLYMA14G06320 I 0.678
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.677
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I 0.677
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I 0.677
PK16550.1 Cannabis sativa PK16550.1 I 0.672
MTR_5g082910 Medicago truncatula MTR_5g082910 I 0.670
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I 0.667
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I 0.664
Sb02g013010 Sorghum bicolor Sb02g013010 I 0.664
Si032789m.g Setaria italica Si032789m.g I 0.664
OS09G0106700 Oryza sativa OS09G0106700 I 0.664
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I 0.664
OBART09G00310 Oryza barthii OBART09G00310 I 0.664
OB09G10200 Oryza brachyantha OB09G10200 I 0.664
GRMZM2G050550 Zea mays GRMZM2G050550 I 0.664
BGIOSGA030245 Oryza indica BGIOSGA030245 I 0.664
OMERI08G05160 Oryza meridionalis OMERI08G05160 I 0.664
OPUNC12G06260 Oryza punctata OPUNC12G06260 I 0.664
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I 0.664
ONIVA09G00250 Oryza nivara ONIVA09G00250 I 0.664
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I 0.664
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I 0.662
mgf025567m Mimulus guttatus mgf025567m I 0.661