CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PGSC0003DMG400044858
(
Solanum tuberosum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
PGSC0003DMG400044858
T277757_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400095287
Myb
3
49
KRRWNPEEDELLHKLVKEHGAENWSLISQLISSRSGKSCRFWWCNQF
PGSC0003DMT400095287
Myb
55
100
HRPFTLEEDNTIIRAHAKLGNRWAKIAHLLPGRTDNAIKNHWNTTL
Links
Other
Myb/SANT
family TFs
Other
Solanum tuberosum
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc04g050000.1
Solanum lycopersicum
Solyc04g050000.1
N
0.755
PGSC0003DMG400034577
Solanum tuberosum
PGSC0003DMG400034577
N
0.713
GLYMA02G43280
Glycine max
GLYMA02G43280
I
0.697
Eucgr.E02958
Eucalyptus grandis
Eucgr.E02958
I
0.692
Gorai.012G149000
Gossypium raimondii
Gorai.012G149000
I
0.683
GLYMA14G06320
Glycine max
GLYMA14G06320
I
0.678
SELMODRAFT_103999
Selaginella moellendorffii
SELMODRAFT_103999
I
0.677
SELMODRAFT_99462
Selaginella moellendorffii
SELMODRAFT_99462
I
0.677
gw1.10.6.1
Physcomitrella patens
gw1.10.6.1
I
0.677
PK16550.1
Cannabis sativa
PK16550.1
I
0.672
MTR_5g082910
Medicago truncatula
MTR_5g082910
I
0.670
POPTR_0007s10490
Populus trichocarpa
POPTR_0007s10490
I
0.667
BGIOSGA030245
Oryza indica
BGIOSGA030245
I
0.664
GRMZM2G050550
Zea mays
GRMZM2G050550
I
0.664
OB09G10200
Oryza brachyantha
OB09G10200
I
0.664
OBART09G00310
Oryza barthii
OBART09G00310
I
0.664
OGLUM09G00340
Oryza glumaepatula
OGLUM09G00340
I
0.664
OMERI08G05160
Oryza meridionalis
OMERI08G05160
I
0.664
ONIVA09G00250
Oryza nivara
ONIVA09G00250
I
0.664
OPUNC12G06260
Oryza punctata
OPUNC12G06260
I
0.664
ORGLA09G0002900
Oryza glaberrima
ORGLA09G0002900
I
0.664
ORUFI09G00360
Oryza rufipogon
ORUFI09G00360
I
0.664
OS09G0106700
Oryza sativa
OS09G0106700
I
0.664
Sb02g013010
Sorghum bicolor
Sb02g013010
I
0.664
Si032789m.g
Setaria italica
Si032789m.g
I
0.664
Pavir.Ba03084
Panicum virgatum
Pavir.Ba03084
I
0.664
gene26289-v1.0-hybrid
Fragaria vesca
gene26289-v1.0-hybrid
I
0.662
mgf025567m
Mimulus guttatus
mgf025567m
I
0.661