CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0010s20210
(
Populus trichocarpa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
POPTR_0010s20210
T278401_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0010s20210.1
Myb
34
80
KGPWSPEEDAVLSQLVSKFGARNWSLIARGIPGRSGKSCRLRWCNQL
Links
Other
Myb/SANT
family TFs
Other
Populus trichocarpa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0008s06320
Populus trichocarpa
POPTR_0008s06320
N
0.909
PRUPE_ppa021680mg
Prunus persica
PRUPE_ppa021680mg
N
0.756
Traes_7DL_1074E21D6
Triticum aestivum
Traes_7DL_1074E21D6
N
0.721
OB06G29870
Oryza brachyantha
OB06G29870
N
0.713
Bo2g149310
Brassica oleracea
Bo2g149310
N
0.697
Al_scaffold_0612_1
Arabidopsis lyrata
Al_scaffold_0612_1
N
0.687
OPUNC08G16060
Oryza punctata
OPUNC08G16060
N
0.662