CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0018s02330
(
Populus trichocarpa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
POPTR_0018s02330
T278515_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0018s02330.1
Myb
201
249
RVVWSVELHRKFVAAVNQLGVDKAVPKKILDLMNVEKLTRENKYRHYLK
POPTR_0018s02330.2
Myb
201
249
RVVWSVELHRKFVAAVNQLGVDKAVPKKILDLMNVEKLTRENKYRHYLK
Links
Other
Myb/SANT
family TFs
Other
Populus trichocarpa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr10G06040_001
Musa acuminata
GSMUA_Achr10G06040_001
N
0.794
GSMUA_Achr2G05130_001
Musa acuminata
GSMUA_Achr2G05130_001
N
0.794
POPTR_0006s27800
Populus trichocarpa
POPTR_0006s27800
N
0.794
OMERI02G33840
Oryza meridionalis
OMERI02G33840
N
0.786
OPUNC02G33090
Oryza punctata
OPUNC02G33090
N
0.786
LPERR02G29550
Leersia perrieri
LPERR02G29550
N
0.786
Ca_01726
Cicer arietinum
Ca_01726
N
0.680