CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0453s00230
(
Populus trichocarpa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
POPTR_0453s00230
T278549_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0453s00230.1
Myb
181
232
RIRWTQGLHEKFIKCVNSLGGAAKAKPKAILKMMETKGLTIVQVKSHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Populus trichocarpa
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0016s04840
Populus trichocarpa
POPTR_0016s04840
N
0.709
chr5.LjT42I01.50.nd
Lotus japonicus
chr5.LjT42I01.50.nd
I
0.701
28582.m000317
Ricinus communis
28582.m000317
N
0.699
cassava12253.valid.m1
Manihot esculenta
cassava12253.valid.m1
N
0.666