CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si032599m.g
(
Setaria italica
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Si032599m.g
T279886_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q8RUX5_MAIZE
M11060_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MRP1_Q2
0.719
0.756
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si032599m
Myb
140
185
FWTNEEHRQFLYGLRKYGRGKWKDISREFVTTRTPVQVSSHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Setaria italica
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si032172m.g
Setaria italica
Si032172m.g
I
0.853
Si025176m.g
Setaria italica
Si025176m.g
I
0.772
GRMZM2G111306
Zea mays
GRMZM2G111306
I
0.719
Q8RUX5_MAIZE
Zea mays
Q8RUX5_MAIZE
D
0.719
Sb09g003390
Sorghum bicolor
Sb09g003390
I
0.719
Sb10g009650
Sorghum bicolor
Sb10g009650
N
0.676
Pavir.J00203
Panicum virgatum
Pavir.J00203
N
0.670
Sb10g009580
Sorghum bicolor
Sb10g009580
I
0.668
F775_29040
Aegilops tauschii
F775_29040
I
0.661
TRIUR3_31684
Triticum urartu
TRIUR3_31684
I
0.661