snpc-4 (Caenorhabditis elegans)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 WBGene00001568 T282143_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
snpc-4
M08151_2.00		 Caenorhabditis elegans
RGCRGCCGACAY
RTGTCGGCYGCY		 ChIP-seq
Mathelier et al.(2014)
MA0544.1		 (Direct) (Direct)
snpc-4
M08216_2.00		 Caenorhabditis elegans
TGAAACAGWDDWWWWT
AWWWWHHWCTGTTTCA		 ChIP-seq
Contrino et al.(2012)
Mw151		 (Direct) (Direct)
snpc-4
M09602_2.00		 Caenorhabditis elegans
CCCGBRARDTGTCGG
CCGACAHYTYVCGGG		 Misc
Heinz et al.(2010)
cElegans-L4-GEI11_modEncode		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
F32H2.1a Myb 250 296
F32H2.1a Myb 301 350
F32H2.1a Myb 409 455
F32H2.1b Myb 250 296
F32H2.1b Myb 301 350
F32H2.1b Myb 409 455

Links

Other Myb/SANT family TFs
Other Caenorhabditis elegans TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action