CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TVAG_268910
(
Trichomonas vaginalis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
TVAG_268910
T282611_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TVAG_087680
M02336_2.00
Trichomonas vaginalis
HARCCTTANH
DNTAAGGYTD
PBM
Weirauch et al.(2014)
pTH7923
0.668
0.772
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TVAG_268910
Myb
23
69
RARFTEEEDKLLKELVINKKNTSWKEIASHLPGRTACQCRDRYNQYL
TVAG_268910
Myb
75
119
NKPWTASEDQIIVEKYRLFGPHWVKISQFLPGRSGNNVKNRWNCA
Links
Other
Myb/SANT
family TFs
Other
Trichomonas vaginalis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_165410
Trichomonas vaginalis
TVAG_165410
I
0.711
TVAG_461870
Trichomonas vaginalis
TVAG_461870
I
0.707
TVAG_458070
Trichomonas vaginalis
TVAG_458070
I
0.691
TVAG_023420
Trichomonas vaginalis
TVAG_023420
I
0.681
TVAG_087680
Trichomonas vaginalis
TVAG_087680
D
0.668
TVAG_165380
Trichomonas vaginalis
TVAG_165380
N
0.668
TVAG_165390
Trichomonas vaginalis
TVAG_165390
N
0.668
TVAG_165400
Trichomonas vaginalis
TVAG_165400
N
0.668