CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm004406
(
Prunus mume
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pm004406
T283466_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm004406
Myb
208
256
RKKWSEAEDLELIAGVRRYGEGNWANILRGDFKGERTANQLSQRWKYIR
Links
Other
Myb/SANT
family TFs
Other
Prunus mume
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa002943mg
Prunus persica
PRUPE_ppa002943mg
N
0.909
Bostr.25494s0029
Boechera stricta
Bostr.25494s0029
N
0.691
Cagra.4395s0155
Capsella grandiflora
Cagra.4395s0155
N
0.691
Carubv10010985m.g
Capsella rubella
Carubv10010985m.g
N
0.691
gene12179-v1.0-hybrid
Fragaria vesca
gene12179-v1.0-hybrid
N
0.688
fgenesh2_kg.1__1026__AT1G09710.1
Arabidopsis lyrata
fgenesh2_kg.1__1026__AT1G09710.1
N
0.679