CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29212.m000178
(
Ricinus communis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
29212.m000178
T283745_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK01261.1
M01275_2.00
Cannabis sativa
TATATWAT
ATWATATA
PBM
Lambert et al.(2019)
pTH10161
0.727
0.538
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29212.m000178
Myb
23
48
KGLWSPEEDEKLIKYMLTNGQGCWRF
Links
Other
Myb/SANT
family TFs
Other
Ricinus communis
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK01261.1
Cannabis sativa
PK01261.1
D
0.727
LjSGA_053007.1
Lotus japonicus
LjSGA_053007.1
N
0.669