CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.048980
(
Cucumis sativus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cucsa.048980
T284363_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.048980.1
Myb
6
59
RGLWSPEEDEKLVKCMKRILSSDGAQAACWSRVPKMAGLERCGKSCRLRWINYL
Cucsa.048980.1
Myb
65
109
RGCFSAEEERTIIDVHRILGNRWAQIAKHLPGRTDNEIKNFWNSS
Links
Other
Myb/SANT
family TFs
Other
Cucumis sativus
TFs
156 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla010067
Citrullus lanatus
Cla010067
N
0.886
Aquca_030_00294
Aquilegia coerulea
Aquca_030_00294
I
0.745
BGIOSGA024270
Oryza indica
BGIOSGA024270
I
0.731
GRMZM2G172327
Zea mays
GRMZM2G172327
I
0.731
LPERR07G12760
Leersia perrieri
LPERR07G12760
I
0.731
OBART07G15150
Oryza barthii
OBART07G15150
I
0.731
OMERI07G11910
Oryza meridionalis
OMERI07G11910
I
0.731
OPUNC07G13970
Oryza punctata
OPUNC07G13970
I
0.731
ORGLA07G0124200
Oryza glaberrima
ORGLA07G0124200
I
0.731
ORUFI07G15620
Oryza rufipogon
ORUFI07G15620
I
0.731
OS07G0497500
Oryza sativa
OS07G0497500
I
0.731
Sb02g033830
Sorghum bicolor
Sb02g033830
I
0.731
Si030152m.g
Setaria italica
Si030152m.g
I
0.731
Pavir.Ba00923
Panicum virgatum
Pavir.Ba00923
I
0.731
Pavir.Bb02786
Panicum virgatum
Pavir.Bb02786
I
0.731
mgf026023m
Mimulus guttatus
mgf026023m
I
0.729
F775_00835
Aegilops tauschii
F775_00835
I
0.725
MLOC_56753
Hordeum vulgare
MLOC_56753
I
0.725
Traes_2AS_40FA27AE7
Triticum aestivum
Traes_2AS_40FA27AE7
I
0.725
TRIUR3_26358
Triticum urartu
TRIUR3_26358
I
0.725
BRADI1G26920
Brachypodium distachyon
BRADI1G26920
I
0.723
VIT_01s0010g00410
Vitis vinifera
VIT_01s0010g00410
I
0.721
PGSC0003DMG400007325
Solanum tuberosum
PGSC0003DMG400007325
I
0.719
Solyc02g082040.2
Solanum lycopersicum
Solyc02g082040.2
I
0.719
Aquca_011_00538
Aquilegia coerulea
Aquca_011_00538
I
0.714
OB07G21090
Oryza brachyantha
OB07G21090
I
0.707
GSMUA_Achr9G11190_001
Musa acuminata
GSMUA_Achr9G11190_001
I
0.705
Traes_2BS_CA02DC5B2
Triticum aestivum
Traes_2BS_CA02DC5B2
I
0.701
gene06920-v1.0-hybrid
Fragaria vesca
gene06920-v1.0-hybrid
I
0.696
Solyc10g005240.2
Solanum lycopersicum
Solyc10g005240.2
I
0.695
Traes_1AL_343F2D219
Triticum aestivum
Traes_1AL_343F2D219
I
0.693
Traes_1AL_C7FD90C13
Triticum aestivum
Traes_1AL_C7FD90C13
I
0.693
TRIUR3_16876
Triticum urartu
TRIUR3_16876
I
0.693
BGIOSGA001460
Oryza indica
BGIOSGA001460
I
0.692
BGIOSGA001461
Oryza indica
BGIOSGA001461
I
0.692
LPERR01G16340
Leersia perrieri
LPERR01G16340
I
0.692
OB01G28670
Oryza brachyantha
OB01G28670
I
0.692
OBART01G18830
Oryza barthii
OBART01G18830
I
0.692
OGLUM01G22380
Oryza glumaepatula
OGLUM01G22380
I
0.692
OMERI01G17650
Oryza meridionalis
OMERI01G17650
I
0.692
ONIVA01G21360
Oryza nivara
ONIVA01G21360
I
0.692
OPUNC01G19230
Oryza punctata
OPUNC01G19230
I
0.692
ORGLA01G0154000
Oryza glaberrima
ORGLA01G0154000
I
0.692
ORUFI01G21210
Oryza rufipogon
ORUFI01G21210
I
0.692
Sb03g024500
Sorghum bicolor
Sb03g024500
I
0.692
Pavir.J18139
Panicum virgatum
Pavir.J18139
I
0.692
Pavir.J20716
Panicum virgatum
Pavir.J20716
I
0.692
BRADI2G40620
Brachypodium distachyon
BRADI2G40620
I
0.689
GRMZM2G064744
Zea mays
GRMZM2G064744
I
0.689
27956.m000359
Ricinus communis
27956.m000359
I
0.687
F775_01821
Aegilops tauschii
F775_01821
I
0.685
GSMUA_Achr8G03510_001
Musa acuminata
GSMUA_Achr8G03510_001
I
0.685
MLOC_6156
Hordeum vulgare
MLOC_6156
I
0.685
TRAES3BF071400020CFD_g
Triticum aestivum
TRAES3BF071400020CFD_g
I
0.685
TRIUR3_27020
Triticum urartu
TRIUR3_27020
I
0.685
Sb09g027200
Sorghum bicolor
Sb09g027200
I
0.684
BGIOSGA027659
Oryza indica
BGIOSGA027659
I
0.683
GRMZM2G325907
Zea mays
GRMZM2G325907
I
0.683
LPERR08G03020
Leersia perrieri
LPERR08G03020
I
0.683
OB08G13090
Oryza brachyantha
OB08G13090
I
0.683
OBART08G03020
Oryza barthii
OBART08G03020
I
0.683
OGLUM08G03030
Oryza glumaepatula
OGLUM08G03030
I
0.683
OMERI08G02950
Oryza meridionalis
OMERI08G02950
I
0.683
ONIVA06G02400
Oryza nivara
ONIVA06G02400
I
0.683
ORGLA08G0023900
Oryza glaberrima
ORGLA08G0023900
I
0.683
ORUFI08G03380
Oryza rufipogon
ORUFI08G03380
I
0.683
OS08G0151300
Oryza sativa
OS08G0151300
I
0.683
Sb07g003320
Sorghum bicolor
Sb07g003320
I
0.683
cassava26068.m1
Manihot esculenta
cassava26068.m1
I
0.683
Eucgr.E04323
Eucalyptus grandis
Eucgr.E04323
I
0.683
Pavir.Fb00364
Panicum virgatum
Pavir.Fb00364
I
0.683
Pavir.J29561
Panicum virgatum
Pavir.J29561
I
0.683
BGIOSGA000952
Oryza indica
BGIOSGA000952
I
0.681
BRADI2G17982
Brachypodium distachyon
BRADI2G17982
I
0.681
BRADI2G47590
Brachypodium distachyon
BRADI2G47590
I
0.681
F775_15721
Aegilops tauschii
F775_15721
I
0.681
GRMZM2G003406
Zea mays
GRMZM2G003406
I
0.681
GRMZM2G175232
Zea mays
GRMZM2G175232
I
0.681
OB01G37060
Oryza brachyantha
OB01G37060
I
0.681
OB05G32030
Oryza brachyantha
OB05G32030
I
0.681
ORGLA01G0230000
Oryza glaberrima
ORGLA01G0230000
I
0.681
OS01G0702700
Oryza sativa
OS01G0702700
I
0.681
Sb03g032260
Sorghum bicolor
Sb03g032260
I
0.681
Si005548m.g
Setaria italica
Si005548m.g
I
0.681
Si022730m.g
Setaria italica
Si022730m.g
I
0.681
TRAES3BF082500050CFD_g
Triticum aestivum
TRAES3BF082500050CFD_g
I
0.681
Pavir.Ca01788
Panicum virgatum
Pavir.Ca01788
I
0.681
Pavir.J19191
Panicum virgatum
Pavir.J19191
I
0.681
MYB26
Arabidopsis thaliana
AT3G13890
I
0.679
Bo1g134790
Brassica oleracea
Bo1g134790
I
0.679
Bo1g138990
Brassica oleracea
Bo1g138990
I
0.679
Bra021515
Brassica rapa
Bra021515
I
0.679
Bra039339
Brassica rapa
Bra039339
I
0.679
MYB26
Arabidopsis lyrata
fgenesh2_kg.3__1496__AT3G13890.1
I
0.679
GLYMA07G01050
Glycine max
GLYMA07G01050
I
0.679
GLYMA08G20440
Glycine max
GLYMA08G20440
I
0.679
GLYMA13G42431
Glycine max
GLYMA13G42431
I
0.679
MTR_2g099740
Medicago truncatula
MTR_2g099740
I
0.679
PGSC0003DMG400037038
Solanum tuberosum
PGSC0003DMG400037038
I
0.679
MYB26
Populus trichocarpa
POPTR_0001s20370
I
0.679
PRUPE_ppa015032mg
Prunus persica
PRUPE_ppa015032mg
I
0.679
Solyc03g121740.1
Solanum lycopersicum
Solyc03g121740.1
I
0.679
TCM_029065
Theobroma cacao
TCM_029065
I
0.679
Ca_02730
Cicer arietinum
Ca_02730
I
0.679
Ca_10069
Cicer arietinum
Ca_10069
I
0.679
Pm013322
Prunus mume
Pm013322
I
0.679
Bostr.28625s0318
Boechera stricta
Bostr.28625s0318
I
0.679
Cagra.0736s0026
Capsella grandiflora
Cagra.0736s0026
I
0.679
Carubv10015767m.g
Capsella rubella
Carubv10015767m.g
I
0.679
Eucgr.F03143
Eucalyptus grandis
Eucgr.F03143
I
0.679
Gorai.009G142200
Gossypium raimondii
Gorai.009G142200
I
0.679
Gorai.011G063900
Gossypium raimondii
Gorai.011G063900
I
0.679
Lus10015608.g
Linum usitatissimum
Lus10015608.g
I
0.679
MDP0000148894
Malus domestica
MDP0000148894
I
0.679
SapurV1A.0177s0130
Salix purpurea
SapurV1A.0177s0130
I
0.679
Thhalv10021042m.g
Eutrema salsugineum
Thhalv10021042m.g
I
0.679
PK22855.1
Cannabis sativa
PK22855.1
I
0.679
MTR_8g017390
Medicago truncatula
MTR_8g017390
I
0.676
cassava176.valid.m1
Manihot esculenta
cassava176.valid.m1
I
0.676
cassava34928.m1
Manihot esculenta
cassava34928.m1
I
0.676
MYB26
Vitis vinifera
VIT_09s0002g01670
I
0.675
Aquca_020_00444
Aquilegia coerulea
Aquca_020_00444
I
0.675
Ciclev10027201m.g
Citrus clementina
Ciclev10027201m.g
I
0.675
GSMUA_AchrUn_randomG21080_001
Musa acuminata
GSMUA_AchrUn_randomG21080_001
I
0.674
MTR_8g017350
Medicago truncatula
MTR_8g017350
I
0.674
Solyc01g087130.2
Solanum lycopersicum
Solyc01g087130.2
I
0.674
VIT_05s0020g01100
Vitis vinifera
VIT_05s0020g01100
I
0.674
PK14287.1
Cannabis sativa
PK14287.1
I
0.674
GSMUA_Achr9G25110_001
Musa acuminata
GSMUA_Achr9G25110_001
I
0.673
Thhalv10022066m.g
Eutrema salsugineum
Thhalv10022066m.g
I
0.673
BGIOSGA020297
Oryza indica
BGIOSGA020297
I
0.672
OMERI05G21780
Oryza meridionalis
OMERI05G21780
I
0.672
ORGLA05G0210500
Oryza glaberrima
ORGLA05G0210500
I
0.672
OS05G0543600
Oryza sativa
OS05G0543600
I
0.672
cassava11527.m1
Manihot esculenta
cassava11527.m1
I
0.672
MTR_8g017340
Medicago truncatula
MTR_8g017340
I
0.670
BRADI3G17165
Brachypodium distachyon
BRADI3G17165
I
0.669
F775_28951
Aegilops tauschii
F775_28951
I
0.669
MLOC_16981
Hordeum vulgare
MLOC_16981
I
0.669
Traes_7DL_5BD0D4BD1
Triticum aestivum
Traes_7DL_5BD0D4BD1
I
0.669
TRIUR3_24104
Triticum urartu
TRIUR3_24104
I
0.669
GLYMA15G02955
Glycine max
GLYMA15G02955
I
0.666
GSMUA_Achr10G08070_001
Musa acuminata
GSMUA_Achr10G08070_001
I
0.666
GSMUA_Achr6G36930_001
Musa acuminata
GSMUA_Achr6G36930_001
I
0.666
OPUNC08G02760
Oryza punctata
OPUNC08G02760
I
0.666
Traes_1AL_25726E5E7
Triticum aestivum
Traes_1AL_25726E5E7
I
0.666
SapurV1A.0538s0150
Salix purpurea
SapurV1A.0538s0150
I
0.666
SapurV1A.1869s0040
Salix purpurea
SapurV1A.1869s0040
I
0.666
PDK_20s1854611g001
Phoenix dactylifera
PDK_20s1854611g001
I
0.666
AMTR_s00032p00221670
Amborella trichopoda
AMTR_s00032p00221670
I
0.664
Bo5g133210
Brassica oleracea
Bo5g133210
I
0.664
Bra034738
Brassica rapa
Bra034738
I
0.664
MTR_8g017440
Medicago truncatula
MTR_8g017440
I
0.663
MTR_8g017540
Medicago truncatula
MTR_8g017540
I
0.663
MDP0000226667
Malus domestica
MDP0000226667
I
0.663
Si002220m.g
Setaria italica
Si002220m.g
I
0.662