Cucsa.177640 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.177640 T284452_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYR2
M02294_2.00 		Arabidopsis thaliana
NKATDCBNN
NNVGHATMN		 PBM
Weirauch et al.(2014)
pTH7097 		0.671 0.660
MYR2
M07063_2.00 		Arabidopsis thaliana
NNDAAKATTCYHHN
NDDRGAATMTTHNN		 Dap-seq
OMalley et al.(2016)
At3g04030_col_a 		0.671 0.660
MYR2
M07064_2.00 		Arabidopsis thaliana
VRAAKATTCBHWNNN
NNNWDVGAATMTTYB		 Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a 		0.671 0.660
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.177640.1 Myb 145 196

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA017828 Oryza indica BGIOSGA017828 I 0.707
BRADI2G21880 Brachypodium distachyon BRADI2G21880 I 0.707
GRMZM2G701218 Zea mays GRMZM2G701218 I 0.707
LPERR05G16760 Leersia perrieri LPERR05G16760 I 0.707
MLOC_63597 Hordeum vulgare MLOC_63597 I 0.707
OB05G28330 Oryza brachyantha OB05G28330 I 0.707
OBART05G20920 Oryza barthii OBART05G20920 I 0.707
OGLUM05G22140 Oryza glumaepatula OGLUM05G22140 I 0.707
OLONG_003406 Oryza longistaminata OLONG_003406 I 0.707
OMERI05G18910 Oryza meridionalis OMERI05G18910 I 0.707
ONIVA05G21630 Oryza nivara ONIVA05G21630 I 0.707
OPUNC05G18630 Oryza punctata OPUNC05G18630 I 0.707
ORUFI05G22210 Oryza rufipogon ORUFI05G22210 I 0.707
OS05G0488600 Oryza sativa OS05G0488600 I 0.707
Sb09g023830 Sorghum bicolor Sb09g023830 I 0.707
Si022265m.g Setaria italica Si022265m.g I 0.707
Traes_1AL_2CFFBD60E Triticum aestivum Traes_1AL_2CFFBD60E I 0.707
Traes_1BL_C0F4A948C Triticum aestivum Traes_1BL_C0F4A948C I 0.707
Traes_1DL_7589A1385 Triticum aestivum Traes_1DL_7589A1385 I 0.707
mgf010580m Mimulus guttatus mgf010580m I 0.707
Pavir.J02359 Panicum virgatum Pavir.J02359 I 0.707
Pavir.J03485 Panicum virgatum Pavir.J03485 I 0.707
AC234155.1_FG002 Zea mays AC234155.1_FG002 I 0.692
SapurV1A.0149s0060 Salix purpurea SapurV1A.0149s0060 I 0.692
GLYMA02G07790 Glycine max GLYMA02G07790 I 0.689
GLYMA11G18990 Glycine max GLYMA11G18990 I 0.689
GLYMA12G31020 Glycine max GLYMA12G31020 I 0.689
GLYMA13G39290 Glycine max GLYMA13G39290 I 0.689
GLYMA16G26820 Glycine max GLYMA16G26820 I 0.689
GSMUA_Achr2G01180_001 Musa acuminata GSMUA_Achr2G01180_001 I 0.689
GSMUA_Achr5G07670_001 Musa acuminata GSMUA_Achr5G07670_001 I 0.689
GSMUA_Achr6G32220_001 Musa acuminata GSMUA_Achr6G32220_001 I 0.689
GSMUA_Achr8G21520_001 Musa acuminata GSMUA_Achr8G21520_001 I 0.689
GSMUA_Achr9G05030_001 Musa acuminata GSMUA_Achr9G05030_001 I 0.689
MTR_2g086450 Medicago truncatula MTR_2g086450 I 0.689
MTR_6g032990 Medicago truncatula MTR_6g032990 I 0.689
PGSC0003DMG400008401 Solanum tuberosum PGSC0003DMG400008401 I 0.689
PGSC0003DMG400028164 Solanum tuberosum PGSC0003DMG400028164 I 0.689
POPTR_0013s05670 Populus trichocarpa POPTR_0013s05670 I 0.689
POPTR_0019s04820 Populus trichocarpa POPTR_0019s04820 I 0.689
PRUPE_ppa015076mg Prunus persica PRUPE_ppa015076mg I 0.689
Solyc10g083340.1 Solanum lycopersicum Solyc10g083340.1 I 0.689
Solyc10g085620.1 Solanum lycopersicum Solyc10g085620.1 I 0.689
TCM_026448 Theobroma cacao TCM_026448 I 0.689
VIT_08s0007g07580 Vitis vinifera VIT_08s0007g07580 I 0.689
Ca_07058 Cicer arietinum Ca_07058 I 0.689
Ca_19147 Cicer arietinum Ca_19147 I 0.689
Pm025303 Prunus mume Pm025303 I 0.689
29813.m001501 Ricinus communis 29813.m001501 I 0.689
cassava11796.valid.m1 Manihot esculenta cassava11796.valid.m1 I 0.689
cassava22618.valid.m1 Manihot esculenta cassava22618.valid.m1 I 0.689
mgf008782m Mimulus guttatus mgf008782m I 0.689
Aquca_072_00114 Aquilegia coerulea Aquca_072_00114 I 0.689
Ciclev10020171m.g Citrus clementina Ciclev10020171m.g I 0.689
Eucgr.K01476 Eucalyptus grandis Eucgr.K01476 I 0.689
evm.TU.supercontig_785.2 Carica papaya evm.TU.supercontig_785.2 I 0.689
gene21073-v1.0-hybrid Fragaria vesca gene21073-v1.0-hybrid I 0.689
Gorai.004G244800 Gossypium raimondii Gorai.004G244800 I 0.689
Gorai.007G287500 Gossypium raimondii Gorai.007G287500 I 0.689
Gorai.012G187000 Gossypium raimondii Gorai.012G187000 I 0.689
MDP0000187636 Malus domestica MDP0000187636 I 0.689
MDP0000288143 Malus domestica MDP0000288143 I 0.689
orange1.1g013552m.g Citrus sinensis orange1.1g013552m.g I 0.689
PK25809.1 Cannabis sativa PK25809.1 I 0.689
Lus10002629.g Linum usitatissimum Lus10002629.g I 0.682
Lus10020264.g Linum usitatissimum Lus10020264.g I 0.682
GLYMA12G09490 Glycine max GLYMA12G09490 I 0.679
SapurV1A.0458s0100 Salix purpurea SapurV1A.0458s0100 I 0.678
AC155434.2_FG005 Zea mays AC155434.2_FG005 I 0.674
BGIOSGA012541 Oryza indica BGIOSGA012541 I 0.674
BGIOSGA014151 Oryza indica BGIOSGA014151 I 0.674
BGIOSGA023696 Oryza indica BGIOSGA023696 I 0.674
Bra007867 Brassica rapa Bra007867 I 0.674
BRADI1G63690 Brachypodium distachyon BRADI1G63690 I 0.674
F775_13717 Aegilops tauschii F775_13717 I 0.674
GLYMA07G35700 Glycine max GLYMA07G35700 I 0.674
GLYMA20G04630 Glycine max GLYMA20G04630 I 0.674
GRMZM2G009060 Zea mays GRMZM2G009060 I 0.674
LPERR03G13840 Leersia perrieri LPERR03G13840 I 0.674
LPERR04G24240 Leersia perrieri LPERR04G24240 I 0.674
LPERR07G23540 Leersia perrieri LPERR07G23540 I 0.674
MLOC_52114 Hordeum vulgare MLOC_52114 I 0.674
MTR_4g081710 Medicago truncatula MTR_4g081710 I 0.674
OB03G25560 Oryza brachyantha OB03G25560 I 0.674
OB04G35670 Oryza brachyantha OB04G35670 I 0.674
OB07G32210 Oryza brachyantha OB07G32210 I 0.674
OBART03G15810 Oryza barthii OBART03G15810 I 0.674
OBART04G28680 Oryza barthii OBART04G28680 I 0.674
OBART07G26710 Oryza barthii OBART07G26710 I 0.674
OGLUM03G15970 Oryza glumaepatula OGLUM03G15970 I 0.674
OGLUM04G28560 Oryza glumaepatula OGLUM04G28560 I 0.674
OGLUM07G26720 Oryza glumaepatula OGLUM07G26720 I 0.674
OLONG_005000 Oryza longistaminata OLONG_005000 I 0.674
OLONG_007529 Oryza longistaminata OLONG_007529 I 0.674
OMERI04G24260 Oryza meridionalis OMERI04G24260 I 0.674
OMERI07G23330 Oryza meridionalis OMERI07G23330 I 0.674
ONIVA03G16790 Oryza nivara ONIVA03G16790 I 0.674
ONIVA04G27220 Oryza nivara ONIVA04G27220 I 0.674
ONIVA07G26450 Oryza nivara ONIVA07G26450 I 0.674
OPUNC03G15310 Oryza punctata OPUNC03G15310 I 0.674
OPUNC04G26200 Oryza punctata OPUNC04G26200 I 0.674
OPUNC07G25120 Oryza punctata OPUNC07G25120 I 0.674
ORGLA03G0151400 Oryza glaberrima ORGLA03G0151400 I 0.674
ORGLA04G0249600 Oryza glaberrima ORGLA04G0249600 I 0.674
ORGLA07G0211200 Oryza glaberrima ORGLA07G0211200 I 0.674
ORUFI03G16400 Oryza rufipogon ORUFI03G16400 I 0.674
ORUFI04G30350 Oryza rufipogon ORUFI04G30350 I 0.674
ORUFI07G27670 Oryza rufipogon ORUFI07G27670 I 0.674
OS03G0325500 Oryza sativa OS03G0325500 I 0.674
OS04G0665600 Oryza sativa OS04G0665600 I 0.674
OS07G0685300 Oryza sativa OS07G0685300 I 0.674
PGSC0003DMG400018426 Solanum tuberosum PGSC0003DMG400018426 I 0.674
Sb01g036680 Sorghum bicolor Sb01g036680 I 0.674
Sb02g043320 Sorghum bicolor Sb02g043320 I 0.674
Sb06g031970 Sorghum bicolor Sb06g031970 I 0.674
Si022099m.g Setaria italica Si022099m.g I 0.674
Si030350m.g Setaria italica Si030350m.g I 0.674
Si036390m.g Setaria italica Si036390m.g I 0.674
Solyc05g007890.2 Solanum lycopersicum Solyc05g007890.2 I 0.674
Traes_4BL_32D8155C6 Triticum aestivum Traes_4BL_32D8155C6 I 0.674
TRIUR3_19658 Triticum urartu TRIUR3_19658 I 0.674
Gorai.013G086300 Gossypium raimondii Gorai.013G086300 I 0.674
Pavir.Ga00160 Panicum virgatum Pavir.Ga00160 I 0.674
Pavir.Ib01520 Panicum virgatum Pavir.Ib01520 I 0.674
Pavir.J24966 Panicum virgatum Pavir.J24966 I 0.674
Thhalv10018902m.g Eutrema salsugineum Thhalv10018902m.g I 0.674
PDK_20s1491101g001 Phoenix dactylifera PDK_20s1491101g001 I 0.674
Al_scaffold_0003_352 Arabidopsis lyrata Al_scaffold_0003_352 I 0.671
AMTR_s00119p00095480 Amborella trichopoda AMTR_s00119p00095480 I 0.671
MYR2 Arabidopsis thaliana AT3G04030 D 0.671
Bo1g153240 Brassica oleracea Bo1g153240 I 0.671
Bra031952 Brassica rapa Bra031952 I 0.671
Bra036412 Brassica rapa Bra036412 I 0.671
cassava35679.valid.m1 Manihot esculenta cassava35679.valid.m1 I 0.671
Cucsa.340600 Cucumis sativus Cucsa.340600 I 0.671
Bostr.2570s0305 Boechera stricta Bostr.2570s0305 I 0.671
Cagra.2026s0004 Capsella grandiflora Cagra.2026s0004 I 0.671
Carubv10013932m.g Capsella rubella Carubv10013932m.g I 0.671
Eucgr.A02082 Eucalyptus grandis Eucgr.A02082 I 0.671
Eucgr.G02494 Eucalyptus grandis Eucgr.G02494 I 0.671
Gorai.013G122900 Gossypium raimondii Gorai.013G122900 I 0.671
Pavir.J03046 Panicum virgatum Pavir.J03046 I 0.671
SapurV1A.0308s0230 Salix purpurea SapurV1A.0308s0230 I 0.671
SapurV1A.0680s0090 Salix purpurea SapurV1A.0680s0090 I 0.671
Thhalv10020861m.g Eutrema salsugineum Thhalv10020861m.g I 0.671
MTR_5g041350 Medicago truncatula MTR_5g041350 I 0.668
Ca_16371 Cicer arietinum Ca_16371 I 0.668
PK03633.1 Cannabis sativa PK03633.1 I 0.668
chr2.CM0641.500.nc Lotus japonicus chr2.CM0641.500.nc I 0.668
PGSC0003DMG400023674 Solanum tuberosum PGSC0003DMG400023674 N 0.664
Solyc10g080460.1 Solanum lycopersicum Solyc10g080460.1 N 0.664
Pavir.J05593 Panicum virgatum Pavir.J05593 I 0.663