CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_1140084
(
Physcomitrella patens
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
estExt_fgenesh1_pg.C_1140084
T284667_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_1140084
Myb
214
248
RRLWTPEEDLALIAAVDKYGEGNWTTRWALIRKRR
Links
Other
Myb/SANT
family TFs
Other
Physcomitrella patens
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA13G41210
Glycine max
GLYMA13G41210
I
0.689
Si034524m.g
Setaria italica
Si034524m.g
I
0.689
Gorai.003G130700
Gossypium raimondii
Gorai.003G130700
I
0.689
Gorai.009G098300
Gossypium raimondii
Gorai.009G098300
I
0.689
MDP0000119092
Malus domestica
MDP0000119092
N
0.689
MDP0000138764
Malus domestica
MDP0000138764
N
0.689
MDP0000222004
Malus domestica
MDP0000222004
N
0.689
SapurV1A.0041s0150
Salix purpurea
SapurV1A.0041s0150
I
0.689
PDK_20s1590481g002
Phoenix dactylifera
PDK_20s1590481g002
N
0.689
Gorai.006G172000
Gossypium raimondii
Gorai.006G172000
I
0.671
SapurV1A.0040s0420
Salix purpurea
SapurV1A.0040s0420
I
0.671
PDK_20s1300944g001
Phoenix dactylifera
PDK_20s1300944g001
N
0.671