estExt_fgenesh1_pg.C_1650042 (Physcomitrella patens)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 estExt_fgenesh1_pg.C_1650042 T284674_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh1_pg.C_Chr_03.00010061
M02364_2.00 		Ostreococcus tauri
NWRMCCYNN
NNRGGKYWN		 PBM
Weirauch et al.(2014)
pTH9419 		0.722 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_1650042 Myb 645 695

Links

Other Myb/SANT family TFs
Other Physcomitrella patens TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh1_pg.C_430108 Physcomitrella patens estExt_fgenesh1_pg.C_430108 I 0.909
SELMODRAFT_406795 Selaginella moellendorffii SELMODRAFT_406795 I 0.850
SELMODRAFT_432103 Selaginella moellendorffii SELMODRAFT_432103 I 0.850
Genemark1.2462_g Coccomyxa subellipsoidea C169 Genemark1.2462_g I 0.725
fgeneshCV_pg.C_scaffold_4000372 Chlorella vulgaris fgeneshCV_pg.C_scaffold_4000372 I 0.725
EuGene.0000020579 Micromonas pusilla EuGene.0000020579 I 0.722
fgenesh1_pm.chr_3_#_182 Ostreococcus RCC809 fgenesh1_pm.chr_3_#_182 I 0.722
AZW_PierreAnnot2.00051 Micromonas sp RCC299 AZW_PierreAnnot2.00051 I 0.722
estExt_fgenesh1_pg.C_Chr_03.00010061 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_03.00010061 D 0.722
SELMODRAFT_59730 Selaginella moellendorffii SELMODRAFT_59730 N 0.716
SELMODRAFT_69727 Selaginella moellendorffii SELMODRAFT_69727 N 0.716
OSTLU_30413 Ostreococcus lucimarinus OSTLU_30413 I 0.694