fgenesh1_pg.scaffold_68000145 (Physcomitrella patens)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 fgenesh1_pg.scaffold_68000145 T284918_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.scaffold_68000145 Myb 62 113

Links

Other Myb/SANT family TFs
Other Physcomitrella patens TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh1_pg.scaffold_32000038 Physcomitrella patens fgenesh1_pg.scaffold_32000038 I 0.849
estExt_fgenesh2_pg.C_1110034 Physcomitrella patens estExt_fgenesh2_pg.C_1110034 I 0.724
MTR_8g086410 Medicago truncatula MTR_8g086410 I 0.688
SELMODRAFT_414222 Selaginella moellendorffii SELMODRAFT_414222 I 0.684
AMTR_s00037p00221530 Amborella trichopoda AMTR_s00037p00221530 I 0.684
SELMODRAFT_422768 Selaginella moellendorffii SELMODRAFT_422768 I 0.684
Cagra.0202s0047 Capsella grandiflora Cagra.0202s0047 I 0.682
Bostr.25993s0515 Boechera stricta Bostr.25993s0515 I 0.682
Carubv10024503m.g Capsella rubella Carubv10024503m.g I 0.682
Ciclev10017867m.g Citrus clementina Ciclev10017867m.g I 0.682
Gorai.004G233300 Gossypium raimondii Gorai.004G233300 I 0.682
orange1.1g035517m.g Citrus sinensis orange1.1g035517m.g I 0.682
SapurV1A.0029s0520 Salix purpurea SapurV1A.0029s0520 I 0.682
LjSGA_106880.1 Lotus japonicus LjSGA_106880.1 I 0.682
Lus10017442.g Linum usitatissimum Lus10017442.g I 0.682
Lus10012239.g Linum usitatissimum Lus10012239.g I 0.682
Lus10002207.g Linum usitatissimum Lus10002207.g I 0.682
Lus10007513.g Linum usitatissimum Lus10007513.g I 0.682
Gorai.011G039000 Gossypium raimondii Gorai.011G039000 I 0.682
Ca_08598 Cicer arietinum Ca_08598 I 0.682
GLYMA13G30154 Glycine max GLYMA13G30154 I 0.682
GLYMA15G08970 Glycine max GLYMA15G08970 I 0.682
GLYMA08G12320 Glycine max GLYMA08G12320 I 0.682
GLYMA05G29161 Glycine max GLYMA05G29161 I 0.682
Bo3g036170 Brassica oleracea Bo3g036170 I 0.682
MTR_2g084230 Medicago truncatula MTR_2g084230 I 0.682
GSMUA_Achr7G13880_001 Musa acuminata GSMUA_Achr7G13880_001 I 0.682
TCM_001726 Theobroma cacao TCM_001726 I 0.682
TCM_029684 Theobroma cacao TCM_029684 I 0.682
Lus10035093.g Linum usitatissimum Lus10035093.g I 0.676
SELMODRAFT_424890 Selaginella moellendorffii SELMODRAFT_424890 I 0.674
SELMODRAFT_423935 Selaginella moellendorffii SELMODRAFT_423935 I 0.674
fgenesh1_pm.C_scaffold_4002002 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002002 I 0.673
AT2G42660 Arabidopsis thaliana AT2G42660 I 0.673
VIT_10s0003g01380 Vitis vinifera VIT_10s0003g01380 I 0.673
Ciclev10018145m.g Citrus clementina Ciclev10018145m.g I 0.661
Gorai.009G161800 Gossypium raimondii Gorai.009G161800 I 0.661