CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.chr_11_#_297
(
Ostreococcus RCC809
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
fgenesh1_pm.chr_11_#_297
T284925_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.chr_11_#_297
Myb
37
88
RGYWSQPEEQALKRAVRKHGIGAWEKMRNDPEFTALRSRTGVQLKDKWRNLI
Links
Other
Myb/SANT
family TFs
Other
Ostreococcus RCC809
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OSTLU_17449
Ostreococcus lucimarinus
OSTLU_17449
N
0.875
estExt_fgenesh1_pg.C_Chr_11.00010228
Ostreococcus tauri
estExt_fgenesh1_pg.C_Chr_11.00010228
N
0.875
EuGene.1200010485
Micromonas sp RCC299
EuGene.1200010485
N
0.714
fgenesh1_pg.C_scaffold_10000277
Micromonas pusilla
fgenesh1_pg.C_scaffold_10000277
N
0.686