CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.2179s0053
(
Capsella grandiflora
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cagra.2179s0053
T286076_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.2179s0053.1.p
Myb
43
88
PQWTRVELERFYDAYRKHGHEWKKVAAAVRNSRSIDMVEALFNMNR
Cagra.2179s0053.2.p
Myb
43
88
PQWTRVELERFYDAYRKHGHEWKKVAAAVRNSRSIDMVEALFNMNR
Links
Other
Myb/SANT
family TFs
Other
Capsella grandiflora
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10012879m.g
Capsella rubella
Carubv10012879m.g
N
0.909
Eucgr.C02776
Eucalyptus grandis
Eucgr.C02776
N
0.676