CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.4686s0011
(
Capsella grandiflora
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cagra.4686s0011
T286156_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.4686s0011.1.p
Myb
88
148
TGRWPRQETLMLLEVRSRLDHKFKESNQKGPLWDEVSRIMSEEHGYTRSGKKCREKFENLY
Links
Other
Myb/SANT
family TFs
Other
Capsella grandiflora
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.22252s0065
Boechera stricta
Bostr.22252s0065
N
0.909
Carubv10015883m.g
Capsella rubella
Carubv10015883m.g
N
0.909
EDA31
Arabidopsis thaliana
AT3G10000
N
0.909
EDA31
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_3000901
N
0.909
Bo2g004170
Brassica oleracea
Bo2g004170
N
0.806
Bra028824
Brassica rapa
Bra028824
N
0.806
PTL
Arabidopsis lyrata
fgenesh2_kg.6__282__AT5G03680.1
N
0.806