CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.8966s0002
(
Capsella grandiflora
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cagra.8966s0002
T286195_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.8966s0002.1.p
Myb
145
191
KGQWNLAEDKLLRKMVKRIGTRRWTEIAKSFQGRVGKQCRERWHNHL
Cagra.8966s0002.1.p
Myb
197
242
KNAWSEEEDQILVQIHKQVGNKWTQIAKRLPGRSENIVKNHWNATK
Links
Other
Myb/SANT
family TFs
Other
Capsella grandiflora
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10007482m.g
Capsella rubella
Carubv10007482m.g
N
0.909
MYB115
Arabidopsis thaliana
AT5G40360
N
0.715
Bo2g144970
Brassica oleracea
Bo2g144970
I
0.663
Bra033027
Brassica rapa
Bra033027
I
0.663
Cagra.11216s0002
Capsella grandiflora
Cagra.11216s0002
I
0.663
Carubv10018693m.g
Capsella rubella
Carubv10018693m.g
I
0.663