CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10006284m.g
(
Capsella rubella
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Carubv10006284m.g
T286257_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10006284m
Myb
30
76
RGHWTQSQDLKLIELVEAYGLDNWDLIGEKMQARTGKSCRFRWLNQL
Carubv10006284m
Myb
82
127
KAPFTVEEEKIMVSAHNFYGNKWSKIAKHLKGRTDIDVKNHWNVHM
Links
Other
Myb/SANT
family TFs
Other
Capsella rubella
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.7809s0001
Capsella grandiflora
Cagra.7809s0001
N
0.909
Cagra.15745s0001
Capsella grandiflora
Cagra.15745s0001
N
0.842