Carubv10020753m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10020753m.g T286404_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10020753m Myb 14 61
Carubv10020753m Myb 67 112

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.3288s0088 Boechera stricta Bostr.3288s0088 N 0.874
MYB95 Arabidopsis thaliana AT1G74430 N 0.857
MYB95 Arabidopsis lyrata fgenesh2_kg.2__1707__AT1G74430.1 N 0.842
Carubv10014503m.g Capsella rubella Carubv10014503m.g N 0.758
Bo6g118730 Brassica oleracea Bo6g118730 N 0.753
Bra015911 Brassica rapa Bra015911 N 0.753
Bo6g118710 Brassica oleracea Bo6g118710 N 0.752
Bra015912 Brassica rapa Bra015912 N 0.752
Thhalv10018987m.g Eutrema salsugineum Thhalv10018987m.g N 0.749
Bo6g087030 Brassica oleracea Bo6g087030 N 0.744
Bra003801 Brassica rapa Bra003801 N 0.744
Bo5g025730 Brassica oleracea Bo5g025730 N 0.697
Bra025678 Brassica rapa Bra025678 N 0.697
AtMYB47 Arabidopsis thaliana AT1G18710 N 0.679
AtMYB47 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001691 N 0.667
Bostr.7128s0480 Boechera stricta Bostr.7128s0480 N 0.663