CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10000065m.g
(
Citrus clementina
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Ciclev10000065m.g
T286479_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10000065m
Myb
42
86
PQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNR
Ciclev10000068m
Myb
42
86
PQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNR
Ciclev10000071m
Myb
42
86
PQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNR
Ciclev10000074m
Myb
42
86
PQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNR
Ciclev10000075m
Myb
42
86
PQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNR
Ciclev10000076m
Myb
42
86
PQWSKGELQRFYEAYRNYGKDWKKVAAQVRNRSAEMVEALYNMNR
Links
Other
Myb/SANT
family TFs
Other
Citrus clementina
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g044351m.g
Citrus sinensis
orange1.1g044351m.g
N
0.909
MDP0000293437
Malus domestica
MDP0000293437
N
0.737
Ciclev10004186m.g
Citrus clementina
Ciclev10004186m.g
N
0.726
MTR_4g119390
Medicago truncatula
MTR_4g119390
N
0.707
Ca_06837
Cicer arietinum
Ca_06837
N
0.706
TCM_026624
Theobroma cacao
TCM_026624
N
0.682
gene22515-v1.0-hybrid
Fragaria vesca
gene22515-v1.0-hybrid
N
0.678
evm.TU.supercontig_16.151
Carica papaya
evm.TU.supercontig_16.151
N
0.672
GSMUA_Achr10G17210_001
Musa acuminata
GSMUA_Achr10G17210_001
N
0.665
Aquca_003_00823
Aquilegia coerulea
Aquca_003_00823
N
0.661