CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_13.140
(
Carica papaya
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
evm.TU.supercontig_13.140
T287058_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_13.140
Myb
725
784
GNKWKPEEVKQLIRMRGELHARFQVVKGRMALWEEISASLMADGINRSPGQCKSLWASLV
Links
Other
Myb/SANT
family TFs
Other
Carica papaya
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla019560
Citrullus lanatus
Cla019560
N
0.721
POPTR_0012s09780
Populus trichocarpa
POPTR_0012s09780
N
0.700
PDK_20s1433191g001
Phoenix dactylifera
PDK_20s1433191g001
N
0.698
SapurV1A.0841s0060
Salix purpurea
SapurV1A.0841s0060
N
0.691
Cagra.0248s0020
Capsella grandiflora
Cagra.0248s0020
N
0.676
Carubv10027519m.g
Capsella rubella
Carubv10027519m.g
N
0.676
Lus10016758.g
Linum usitatissimum
Lus10016758.g
N
0.668