CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_8.2
(
Carica papaya
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
evm.TU.supercontig_8.2
T287187_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_8.2
Myb
119
169
LRWTGELHDRFLNAVKQLGGPFKATPKGVMEMMDVSGLELCHVKSHLQEHK
Links
Other
Myb/SANT
family TFs
Other
Carica papaya
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00025p00151950
Amborella trichopoda
AMTR_s00025p00151950
I
0.686
AMTR_s00094p00028710
Amborella trichopoda
AMTR_s00094p00028710
I
0.665
BGIOSGA023422
Oryza indica
BGIOSGA023422
I
0.665
BGIOSGA023423
Oryza indica
BGIOSGA023423
I
0.665
Bo6g081020
Brassica oleracea
Bo6g081020
I
0.665
Bra003611
Brassica rapa
Bra003611
I
0.665
BRADI1G31837
Brachypodium distachyon
BRADI1G31837
I
0.665
GRMZM2G081671
Zea mays
GRMZM2G081671
I
0.665
GRMZM2G113742
Zea mays
GRMZM2G113742
I
0.665
GSMUA_Achr11G14430_001
Musa acuminata
GSMUA_Achr11G14430_001
I
0.665
GSMUA_Achr3G23640_001
Musa acuminata
GSMUA_Achr3G23640_001
I
0.665
GSMUA_Achr9G01710_001
Musa acuminata
GSMUA_Achr9G01710_001
I
0.665
LPERR06G19840
Leersia perrieri
LPERR06G19840
I
0.665
LPERR08G09740
Leersia perrieri
LPERR08G09740
I
0.665
OB06G31630
Oryza brachyantha
OB06G31630
I
0.665
OBART08G11780
Oryza barthii
OBART08G11780
I
0.665
OGLUM06G25170
Oryza glumaepatula
OGLUM06G25170
I
0.665
OGLUM08G12590
Oryza glumaepatula
OGLUM08G12590
I
0.665
OMERI06G23830
Oryza meridionalis
OMERI06G23830
I
0.665
ONIVA03G43890
Oryza nivara
ONIVA03G43890
I
0.665
ONIVA09G02600
Oryza nivara
ONIVA09G02600
I
0.665
OPUNC06G21660
Oryza punctata
OPUNC06G21660
I
0.665
ORGLA06G0200700
Oryza glaberrima
ORGLA06G0200700
I
0.665
ORUFI06G25680
Oryza rufipogon
ORUFI06G25680
I
0.665
ORUFI08G13020
Oryza rufipogon
ORUFI08G13020
I
0.665
OS08G0346400
Oryza sativa
OS08G0346400
I
0.665
Sb10g026550
Sorghum bicolor
Sb10g026550
I
0.665
Si006865m.g
Setaria italica
Si006865m.g
I
0.665
TCM_030479
Theobroma cacao
TCM_030479
I
0.665
Traes_7BL_AE0BEF1BE
Triticum aestivum
Traes_7BL_AE0BEF1BE
I
0.665
Traes_7DL_B26E341BE
Triticum aestivum
Traes_7DL_B26E341BE
I
0.665
TRIUR3_14321
Triticum urartu
TRIUR3_14321
I
0.665
Ciclev10016073m.g
Citrus clementina
Ciclev10016073m.g
I
0.665
Eucgr.H00055
Eucalyptus grandis
Eucgr.H00055
I
0.665
Gorai.004G268700
Gossypium raimondii
Gorai.004G268700
I
0.665
Gorai.010G247200
Gossypium raimondii
Gorai.010G247200
I
0.665
Lus10007132.g
Linum usitatissimum
Lus10007132.g
I
0.665
Lus10016676.g
Linum usitatissimum
Lus10016676.g
I
0.665
orange1.1g021481m.g
Citrus sinensis
orange1.1g021481m.g
I
0.665
orange1.1g022072m.g
Citrus sinensis
orange1.1g022072m.g
I
0.665
Pavir.Da00259
Panicum virgatum
Pavir.Da00259
I
0.665
Pavir.Fb00789
Panicum virgatum
Pavir.Fb00789
I
0.665