CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ca00737
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.Ca00737
T289056_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ca00737.1.p
Myb
55
113
PQWSHAETAAFLAVRAELDHSFLTTKRNKALWEAVSARLQAQGFARTPDQCKSKWKNLV
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G016637
Zea mays
GRMZM2G016637
N
0.810
Sb09g002370
Sorghum bicolor
Sb09g002370
N
0.810
OPUNC05G01820
Oryza punctata
OPUNC05G01820
N
0.777
OB05G11980
Oryza brachyantha
OB05G11980
N
0.746
BRADI2G38230
Brachypodium distachyon
BRADI2G38230
N
0.678