CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Db01742
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.Db01742
T289109_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Db01742.1.p
Myb
134
180
RFWTKEEHRKFLKGLDAYGRGSWKNISRHFVPNKTPVQICSHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb09g003340
Sorghum bicolor
Sb09g003340
N
0.718
Pavir.J10627
Panicum virgatum
Pavir.J10627
N
0.708
Si007873m.g
Setaria italica
Si007873m.g
N
0.667