Pavir.J24104 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J24104 T289419_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J24104.1.p Myb 25 72
Pavir.J24104.1.p Myb 78 122

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si002595m.g Setaria italica Si002595m.g N 0.877
Pavir.Eb00461 Panicum virgatum Pavir.Eb00461 N 0.877
GRMZM2G143274 Zea mays GRMZM2G143274 N 0.819
F775_22234 Aegilops tauschii F775_22234 N 0.807
MLOC_19052 Hordeum vulgare MLOC_19052 N 0.803
TRIUR3_34833 Triticum urartu TRIUR3_34833 N 0.803
TRAES3BF059600070CFD_g Triticum aestivum TRAES3BF059600070CFD_g N 0.759
OB01G14200 Oryza brachyantha OB01G14200 N 0.757
LPERR01G04110 Leersia perrieri LPERR01G04110 N 0.737
ORUFI01G04650 Oryza rufipogon ORUFI01G04650 N 0.722
Sb05g001215 Sorghum bicolor Sb05g001215 N 0.718
OBART01G04450 Oryza barthii OBART01G04450 N 0.667