Pavir.J27770 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J27770 T289435_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J27770.1.p Myb 96 141

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ib02262 Panicum virgatum Pavir.Ib02262 I 0.813
BRADI3G33440 Brachypodium distachyon BRADI3G33440 I 0.798
F775_27786 Aegilops tauschii F775_27786 I 0.795
GRMZM2G088524 Zea mays GRMZM2G088524 I 0.795
MLOC_10280 Hordeum vulgare MLOC_10280 I 0.795
Si036966m.g Setaria italica Si036966m.g I 0.795
Traes_1AL_F7D2C31DB Triticum aestivum Traes_1AL_F7D2C31DB I 0.795
Traes_1BL_F809FA27D Triticum aestivum Traes_1BL_F809FA27D I 0.795
Traes_1DL_6506152C8 Triticum aestivum Traes_1DL_6506152C8 I 0.795
Pavir.Hb00090 Panicum virgatum Pavir.Hb00090 I 0.793
LPERR10G14440 Leersia perrieri LPERR10G14440 I 0.777
OB10G25700 Oryza brachyantha OB10G25700 I 0.777
OPUNC10G16980 Oryza punctata OPUNC10G16980 I 0.756
BGIOSGA031396 Oryza indica BGIOSGA031396 I 0.744
MYBS2 Oryza indica BGIOSGA031397 I 0.744
OBART10G18600 Oryza barthii OBART10G18600 I 0.744
OGLUM10G18690 Oryza glumaepatula OGLUM10G18690 I 0.744
OLONG_008990 Oryza longistaminata OLONG_008990 I 0.744
OMERI08G00360 Oryza meridionalis OMERI08G00360 I 0.744
ONIVA10G21110 Oryza nivara ONIVA10G21110 I 0.744
ORGLA10G0137400 Oryza glaberrima ORGLA10G0137400 I 0.744
ORUFI10G19790 Oryza rufipogon ORUFI10G19790 I 0.744
MYBS2 Oryza sativa OS10G0562100 I 0.744
Sb01g028870 Sorghum bicolor Sb01g028870 I 0.717